Lutra lutra (Eurasian river otter): 125080101
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Entry
125080101 CDS
T08100
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125080101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125080101
03036 Chromosome and associated proteins [BR:
llv03036
]
125080101
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125080101
Coactivators
SAGA/TFTC/STAGA complex
125080101
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
125080101
STAGA complex
125080101
TFTC complex
125080101
SAGA complex
125080101
SLIK complex
125080101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
125080101
NCBI-ProteinID:
XP_047549906
LinkDB
All DBs
Position
10:105793065..105804745
Genome browser
AA seq
626 aa
AA seq
DB search
MQSSSGAMSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQ
FMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREGELYFPEDREVNLVELA
LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYQQVTRAVLGDDP
QLMKIALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLVRNPHLCLGP
YVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSL
QKVLADPVRPLCSHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQAVLDDYSVSNAQVKA
DGHKVYGAILVAVERLLKMKAQAAEPNKSGPSGRGCRGSDDLPWDSLLLQESPSGGSAEP
GFGSVLPLPPGGAGPEDPSPSVTLADIYRELYAFFGDSLATRFGTGQPAPSTPRPPGDKK
EPVAAPDSVRKMPQLTANAMVSPQGDESPRGGGPAAASAPAASESRPLPRVHRARGAPRQ
QGPGAGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPFGPSPASRYVQ
KLPMIGRTGRPARRWALSDYSLYLPL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagctccagcggagccatgtcagagcgggaagagcggcggtttgtggagatccct
cgggagtcggtccggctcatggcagagagcacgggcctggagctgagcgatgaggtggcg
gccctgctcgcggaggacgtgtgctaccggctcagagaggccacgcagaatagctcgcag
ttcatgaaacacaccaaacggcggaagctgaccgtcgaggatttcaacagggctctccga
tggagcagcgtggaggccgtgtgtggttatgggtcccaggaggcgctgcccctgcgccct
gccagagagggtgagctgtacttccctgaggaccgagaggtgaacctggtagagctggcc
ttggccaccaacatccctaaaggctgtgccgagacagctgtgagagttcatgtctcctac
ctagacggcaaagggaacctggccccgcaaggatcagtgcccagcgcggtgtcttcgctg
actgatgaccttctcaagtactaccaacaagtgacccgggctgtgctgggggacgatcca
cagctaatgaagattgctctccaggacctgcagactaactccaagatagcggcccttctg
ccttactttgtctatgtggtcagtggggtgaaatctgttagccacgacctggagcagctg
caccggctcctgcaagtggcccggagcctggttcggaacccacacttgtgcttggggccg
tacgttcgctccctggtaggcagcgtcctctactgcgtcctagagccgctggctgcctcc
atcaaccctctgaatgaccactggactcttcgggatggcgccgccctcctgctcagccac
atcttctggacccacggggacctggtgagcggcctttatcagcagatcctgctctccctg
cagaaggtcttggcagacccggtgcggcctctctgctctcattacggggctgtggtgggg
ctgcatgcccttggctggaaggcggtggaacgagtcctgtacccacacctgtccacttac
tggacaaatctgcaggctgtgctagatgattattccgtctctaacgcccaggttaaagca
gatgggcacaaggtttatggagccattctggtggctgtggagcgactgctgaagatgaag
gcccaggcagcagagcccaacaagagcggcccaagcggcagggggtgccggggctcggat
gatctcccctgggacagcctccttctgcaggagtctccctccgggggcagcgcggagcca
ggctttgggtctgtcctcccgctgccgccaggaggcgcggggccggaggacccttcccca
tcggtgaccctggcggacatctaccgggagctgtacgccttcttcggggacagcttggcc
acccgctttggcaccggtcagcccgcacccagcactccgcggccgcccggggacaagaag
gagccggtggccgctccggactcggtgcgcaagatgccgcagttgacggccaacgccatg
gtcagcccgcagggcgacgagagcccccgcggcggcggccccgcggcagcctctgcgccc
gccgcctccgagagccggccgctgccgcgcgtgcaccgggcgcggggggcgccccgccag
caggggcccggcgccggcacccgcgacgtcttccagaagagccgcttcgccccgcgcggc
gccccccacttccggttcatcattgccgggcggcaggccgggaggcggtgccgcgggcgc
ctcttccagacggccttccccgcgccattcgggcctagcccggcctcgcgctacgtgcag
aagctgcccatgatcggccgcaccggccgcccggcccgccgctgggcgctctcagactac
tcgctgtaccttccgctttga
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