KEGG   Lutra lutra (Eurasian river otter): 125080109
Entry
125080109         CDS       T08100                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03020  RNA polymerase
llv03420  Nucleotide excision repair
llv05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125080109
  09124 Replication and repair
   03420 Nucleotide excision repair
    125080109
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    125080109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:llv03021]
    125080109
   03019 Messenger RNA biogenesis [BR:llv03019]
    125080109
   03400 DNA repair and recombination proteins [BR:llv03400]
    125080109
Transcription machinery [BR:llv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     125080109
Messenger RNA biogenesis [BR:llv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     125080109
DNA repair and recombination proteins [BR:llv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125080109
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N
Other DBs
NCBI-GeneID: 125080109
NCBI-ProteinID: XP_047549923
LinkDB
Position
10:105783997..105788236
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ
PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD
PNSNPPCYKTMDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttatcacatctccctggagcacgagatcctgctgcacccgcgctacttcggcccc
aacctgctcaacaccgtaaagcagaagctcttcacggaggtggaggggacttgcaccggc
aagtacggctttgtaattgctgtcaccaccattgacaatattggtgctggtgtgatccag
ccaggccgaggatttgttctttatccggttaagtacaaggccattgttttccggcccttt
aaaggggaggttgtggatgctgttgtcactcaagtcaacaaggtggggctcttcacagaa
atcggacctatgtcctgcttcatctctcgacattccatcccatcagagatggagtttgac
cccaactccaacccaccctgttacaagacaatggatgaggacattgtgattcagcaggac
gatgagatccgcttgaagattgtggggacccgtgtggacaagaatgacatttttgctatt
ggctctctgatggacgactacttggggcttgtgagctga

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