Lutra lutra (Eurasian river otter): 125080409
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Entry
125080409 CDS
T08100
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04151
PI3K-Akt signaling pathway
llv04510
Focal adhesion
llv04512
ECM-receptor interaction
llv05145
Toxoplasmosis
llv05146
Amoebiasis
llv05165
Human papillomavirus infection
llv05200
Pathways in cancer
llv05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125080409
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125080409
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125080409
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125080409
09162 Cancer: specific types
05222 Small cell lung cancer
125080409
09172 Infectious disease: viral
05165 Human papillomavirus infection
125080409
09174 Infectious disease: parasitic
05146 Amoebiasis
125080409
05145 Toxoplasmosis
125080409
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG16
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
125080409
NCBI-ProteinID:
XP_047550135
LinkDB
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Position
1:204928313..204940169
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AA seq
1801 aa
AA seq
DB search
MERASGDRGRDLRGQPGPWALRLGLLLSVLATALAQALVPDVPACSRGSCYPATGDLLVG
RADRLTASSTCGLHGPQPYCIVSHLQDEKKCFLCDSRRPFSARDNPNSHRIQNVVTSFAP
QRRTAWWQSENGVPVVTIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWHVYRY
FSYDCGADFPGVPLAPPRHWDDIVCESRYSEIEPSTEGEVIYRVLDPAIPIPDPYSPRIQ
NLLKITNLRVNLTRLHTLGDNLLDPRREIREKYYYALYELVVRGNCFCYGHASQCAPAPG
APAHAEGMVHGACVCKHNTRGLNCEQCQDFYHDLPWRPAEDGHSHACRKCECHGHAHSCH
FDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDPSKDLRDPAVCRSCDCDPMGS
QDGGRCDPHDDPAMGLVSGQCRCKEHVVGSRCQQCRDGFFGLSASDPAGCRRCQCDARGT
VPGVTSCDPNSGTCFCKRLVTGRGCNRCLPGHWGLSHDLLGCRPCDCDVGGALDPQCNEA
TGQCRCRQHMVGRRCEQVQPGYFRPFLDHLTWEAEDTQGQMVDVVERLATPSGTPSWTGR
GFVRLQEGQMLEFLVASVPRAMDYDLLLRLEPQVPEQWAEMEVTVQRPGPVSAHSLCGHV
LPKDDHIPGTLRPETRYMVFPRPVCLEPGMSYKVHLKLVRTGGSTQMDAPYSGPSLLIDS
LVLLPRVLVLEMFSGGDAEALERRATFERYRCHEEGLVPSKTPPSEACAPLLISLSAVLY
NGALPCQCDPQGSLSSECDPHGGQCLCKPAVVGRRCDVCAPGFYGFGPTGCQACQCSSEG
ALSGLCEGTSGQCPCRTGAFGLRCDRCQRGQWGFPSCQPCVCNGHADECDTRTGTCLGCR
DHTGGEHCERCIAGFHGDPRLPYGGQCRPCPCPEGPGSRRHFATSCHRDGYSQQIVCHCR
AGYTGSRCDACAPGYFGDPSRPGGQCQPCECSGNIDPTDPDACDPRTGQCLRCLHHTEGP
HCAHCKPGFHGQAARQNCHRCVCNLLGTDPRHCPSTDRCNCDPSSGQCPCLPNVQGPSCD
RCAPNFWNLTSGHGCQPCACHPSRARGPTCNEFTGQCHCRAGFGGRTCSECQELHWGDPG
LQCRVCDCDPRGIDTPQCHRSTGHCSCRPGVSGVRCDQCARGFSGVFPACHPCHACFGDW
DRVVQDLAARTRRLEQRAQELQQTGVLGAFESSFWHIQEKLGTVQGIVGARNASAASTAQ
LMESTEELRREIGEATEHLTRLEAELTDVQDENFNANHALSSLERDGLALNLTLRQLDQH
LDLLKHSNFLGAYDSIRHAHSLSAEAEHRANASALTMPSPVSNSADTRHRTEELMAAQRE
DFNRKHMANQRALGELSARTHSLSLTAINELVCGPPGDAPCATSPCGGAGCLDEDGQPRC
GGLGCSGAVAMADLALGRARHTQAELQRALAEGGGILSQVAETRRQAGEAQQRAQAALDK
ANASRGQVEKANQELRELIQNVKDFLSQEGADPDSIEMVATRVLELSIPASPEQIQHLAG
AIAERVRSLADVDTILARTVGDVRRAEQLLQDARRARSRAEGEKQKAEIVQAALEEAQRA
QGAAQGAIQGAVVDTQDTERTLHQVQEKVAGAEQALSSAGERAQELDGLLEALKLKRAGN
SLAASSAEETAGNAQGRAREAEQLLQGPVGDQYQTVKALAERKAQGVLAAQERAEQLRDE
ARGLLQAAQDKLQRLQELEGTYEENERALEGKAAQLDGLEARMRSVLQAINLQVQIYNTC
Q
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggcctcaggggaccgagggagggacctgcggggacagccggggccctgggct
cttcgactgggcctactgctgagtgtgctggccaccgccctggcccaggccctcgtccca
gatgtgccagcctgttcgaggggaagctgctaccctgccacaggtgacctgctagtgggc
cgtgctgacagactgactgcctcctccacctgtggcttgcatggcccccaaccctactgc
attgttagtcacctgcaggatgagaagaagtgcttcctgtgtgactcccggcgccccttc
tctgctagagacaacccaaacagccatcgcatccagaatgtagttaccagctttgcacca
cagcgccggacagcctggtggcagtcagagaatggtgtccccgtggtcaccatccagctg
gacttggaggctgagtttcatttcacgcacctcattatgaccttcaagacatttcgtcct
gctgccatgctggtggagcgctcagctgactttggacgcacctggcatgtctaccgatat
ttttcctatgactgtggggctgactttccaggagtcccactggcccccccacggcactgg
gatgacatagtctgtgagtcccgctactcagagattgagccatctactgaaggcgaggtc
atctatcgtgtgctggatcctgccatccctatcccagacccgtatagcccacggatccag
aacctgctgaagatcaccaacctacgggtgaacctgacacggctgcacacactgggggac
aacctgctcgacccacggcgggagatccgtgagaaatactattacgccctctacgagctg
gttgtgcgtggcaactgcttctgttatggacatgcctcgcagtgtgcacccgccccagga
gcaccagcccatgctgagggcatggttcatggggcctgcgtctgcaaacacaacactcgt
ggcctcaactgtgagcagtgtcaggatttctatcatgacttgccctggcgtccagctgag
gatggccacagtcatgcctgcaggaagtgtgagtgccatgggcacgcccacagctgccac
tttgacatggccgtatacctggcgtctggcaacgtgagtggaggcgtgtgtgatggatgt
cagcacaatacagctgggcgccactgtgagctctgccgacccttcttctaccgtgaccca
agcaaggacctgcgggacccagctgtgtgccgctcctgtgactgtgaccccatgggttcc
caagacggtggtcgctgtgatccccatgatgatcctgctatggggctggtttcgggccag
tgtcgctgcaaagaacatgtggtgggctctcgctgccagcaatgccgtgatggcttcttt
gggctcagtgccagcgaccctgcaggctgccggaggtgtcagtgtgatgcacggggcaca
gtgcctggggtcacttcctgtgaccccaacagtggaacctgtttctgcaagcgtctagtg
actggacgtggctgtaaccgctgcctgcctggtcactggggcctgagccatgatctgctt
ggctgccgtccgtgtgattgcgacgtgggtggtgccttggatccccagtgcaatgaggcc
acaggtcagtgccgctgtcgccagcacatggtggggcgacgctgtgagcaggtgcagcct
ggctacttccggcccttcctggaccacctaacttgggaggcagaggacacccaagggcag
atggtcgacgtggtggagcgcttggcgacccctagtgggactccatcctggacaggccgg
ggctttgttaggctgcaggaaggtcagatgctggagttcctggtcgcctctgtgccgaga
gccatggactacgacctgctgctgcgcttggagccccaggtccctgagcaatgggcagag
atggaagtgaccgtgcagcgcccagggcctgtgtctgcccacagcctgtgtgggcatgtg
ctgcccaaggatgaccacatcccagggactctgcgaccagaaacccggtatatggtgttt
cccagacctgtctgccttgagcctggcatgtcttacaaagtacatctgaagctggtgcga
acagggggaagcacccagatggatgctccctactctggacccagcctgctcattgactcg
ctggtgctgctgccccgtgtcctggtgctagagatgtttagtgggggggacgccgaggct
ctggagcgccgtgccacctttgaacgctaccgctgccatgaggaggggctggtgcccagt
aagacccctccctctgaggcctgcgcccccctcctcatcagcctgtccgccgtcctctac
aacggtgccttgccctgtcagtgtgaccctcagggctccctaagttctgagtgtgatccc
catggcggccagtgcctgtgtaagcctgcggtggtggggcgccgctgtgacgtctgtgcc
cctggcttctacggctttggccccacaggctgtcaagcctgccagtgcagttccgagggg
gcactcagtggcctgtgtgaagggaccagtgggcaatgcccctgccgaactggggccttc
gggcttcggtgcgatcgctgccagcgtggccagtggggatttcctagctgccagccatgt
gtctgcaacgggcacgcagacgagtgtgacacccgcacgggcacttgcctgggctgccgt
gatcacaccgggggtgagcactgtgaaaggtgcattgctggcttccatggggacccacgg
ctcccatatgggggccagtgccggccctgtccctgccctgaaggccctgggagccggcgg
cactttgctacttcctgccatagggatgggtactcccagcagatcgtgtgccactgtagg
gcgggctacacagggtcgcggtgtgatgcttgtgcccctgggtactttggggacccgtca
aggccgggtggccagtgccaaccgtgtgagtgcagtgggaacattgaccccacggaccct
gatgcctgtgacccccgcacgggacaatgcctgcgctgcttacaccacacggaggggccc
cactgtgcccactgcaagcctggcttccatgggcaggctgcccgacagaactgtcaccgc
tgcgtctgcaacttgctgggtaccgatccccggcattgcccgtccactgaccgctgcaac
tgtgacccaagcagtgggcagtgcccatgcctccccaatgtccagggccctagctgtgac
cgctgtgcccccaacttctggaaccttaccagcggccatggctgccagccctgtgcctgc
cacccaagccgagccagaggccccacctgcaatgagttcacagggcagtgccactgccgt
gctggctttggtgggcgaacttgttctgagtgccaagagctccattggggagaccctggg
ttgcagtgccgtgtctgtgactgtgaccctcgtggaatagacacacctcagtgtcaccgc
tccacagggcactgcagctgccgcccaggcgtgtcaggcgtgcgctgtgaccagtgtgcc
cgaggcttctcaggagtctttcctgcttgccacccatgccacgcatgcttcggggattgg
gaccgagtggtccaggacttggctgcccgtacacggcgcctggaacagcgggcacaggag
ctgcagcagacgggtgtgctgggcgcctttgagagcagtttctggcacatacaggagaag
ctggggactgtgcaggggattgtgggtgcccgcaacgcctcagctgcctccactgcacag
ctcatggagtccacagaggagctgcggcgtgaaattggagaggccactgagcacctgacc
cggctggaggcagaactgacagatgtgcaggatgagaacttcaacgccaaccatgcactg
agcagtctggagcgagatgggcttgcacttaatctcacactgcggcagctggatcagcat
ctagacctgctcaagcattcaaacttcctgggtgcctatgacagcatccgccacgcccac
agtctgtctgcagaggcagaacatcgtgccaacgcatcggccttgacaatgcccagccct
gtgagcaactcagcagatacccggcaccggacagaggagctaatggctgcccagagggag
gacttcaaccgcaaacacatggccaaccagagggcactaggcgagctctctgcccgtacc
cattccctgagcttgacagccataaatgaactggtgtgtggacccccaggggatgcaccc
tgtgctacaagcccttgtgggggtgccggctgtctggacgaggatgggcagccccgctgt
gggggcctcggctgcagtggggcagtagccatggcggacctggcactgggccgggccagg
cacacacaggcagagttgcagcgggcactggcagaaggtggtggcatcctcagccaggtg
gctgagacgcgtcggcaggcaggcgaggcacagcagcgggcccaggcagccctggacaag
gctaatgcttccaggggacaggtggagaaggccaaccaagaacttcgggaacttatccag
aatgtgaaggacttcctcagccaggagggggctgatcccgatagcattgagatggtggcc
acacgagtgctagagctctccatcccagcatcacctgagcagattcagcacctggcaggc
gcgattgcggagagagtccggagcctggcagatgtggacacaatcctggcccgtactgtg
ggagatgtgcgtcgggcagagcagctactacaagatgcacggcgggcaaggagccgggct
gagggtgagaaacagaaggcagaaattgtacaggcagcactggaggaagcccagagggca
cagggtgctgctcagggtgccattcagggggcagtagttgacacacaggacaccgagcga
accctgcaccaggtgcaggagaaggtggcaggtgcggagcaggcactgagctctgcaggc
gagcgggctcaggagttggatggtctcctggaggctctgaaattgaaacgagcagggaat
agcctggcagcctctagcgctgaagaaacagcaggcaatgcccagggtcgtgcccgggaa
gctgagcagctgctgcagggcccagtaggcgaccagtaccagacggtgaaggctttggct
gagcgcaaggcccagggtgtgctggctgcgcaggagcgggcagagcagcttcgggatgag
gctcgaggcttgttgcaggctgctcaggacaagctgcaacggttgcaagagctggagggc
acctatgaggagaacgaacgggccctggaaggcaaagccgcccagctggatgggctggag
gccaggatgcgtagtgtgcttcaagctatcaacctgcaggtccagatctacaacacttgc
cagtga
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integrated database retrieval system