Lutra lutra (Eurasian river otter): 125080439
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Entry
125080439 CDS
T08100
Name
(RefSeq) cytoplasmic dynein 2 intermediate chain 1-like
KO
K22869
WD repeat-containing protein 60
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
llv03037
]
125080439
Cilium and associated proteins [BR:
llv03037
]
Primary cilia and associated proteins
Dynein and associated proteins
125080439
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
125080439
NCBI-ProteinID:
XP_047550188
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All DBs
Position
11:108406917..108468837
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AA seq
1039 aa
AA seq
DB search
MRRRAGDGRGALWDTCGSALFSLCLPIARSWEGQERARGSRAACRDGGRSALRCSRLPVA
RSRGRRPAVRAFDPRWSPGREEQKMILGKQMTSESIFCKQVRTEEKERRDEDPERGDEER
ERRYRERKLQYGDSKDNPLKYWLYKEEGEKRHRKQKEPDRERKHREKSSTRERREKYPKE
KSDSFSGKEGEERHKEKRHKEGFHFDEERRQGDMDKKERLSREELKKRESKSSEHRRRGA
SSRRDPTSSREGPCALWYAENLVRNNEKDKDSRGKHSREEGALVWKLAPKCGREETAEVE
KEDFDSESAGGDEYTACFEDDFEDYEDDFEVCDGDDDSSDELGAREKIEELPLARKKEIQ
EVQKAINAENERVSELSCRLAQKQGPLEGERDLKTGANSSPARTPVCGIFVDFASASHRE
KSRTRALKQKMRSTRLLRLLDLDFSFTFSLLDLPPVNEYDMYIRNFGKKNTKQVYVQYNE
DAVDRDVQTEEIETRGVWTQHPAEGATVSGGSGSGELCDVATALKVDTPRLSSFLRAACQ
VIAVLLEEDRVGPEPGWSPGTQDGTLPVSDRSSQLNASLPFLQSKGCSAGVLVRTEHSLL
LPPVSLSRGFPTRPPWPSEGQDRTVLCLCACQGQRQTVVSVHGLPGAPFAPALDGRYVLC
VWDIWQPSGPQKVLICESKVTCCCFSPFKAFLLFAGTVHGSVVVWDLREDSGIHRYVKLG
DCFWTFRTATFSTDGILTSVNHCSPVQAVEPVSTPVYRKQSFVLSPFSTQEEMSGLSFHV
ASLDESGVLNVWVVVELPKADIAGSVSDLGLIPGGRVKLVHSAVVRLSDGLSHTCFEFWG
AMQTLNVKFLPSDPSRFIVGTDVGLISHGTRQDLKVSPKLYKPQQPGMRPVKVNVIDLSP
FGEPVFLAGCSDGSIRLHQLTSERPLLQWDGSTDGHAVIGLHWSLTRPAVFLAQDDTSCI
YVWDLLESDLGPVAKQLVSPDRLVAMTVVGEAEKANGSFLALVLARASGRMDVQYLKRTW
AAPVADELRKLQLLLREAL
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggcgcgccggggacggccgcggggcactttgggacacctgtggctcggcgctc
ttctccttatgcctgccaattgctcggagctgggagggccaggagcgcgctcggggcagc
cgcgcggcatgccgggacggcggtcgttcggccctccgctgctcacgcctgccagttgct
aggagccggggacgccggccggcggtccgggccttcgatccgcgatggagcccgggaaga
gaagaacaaaagatgatacttggaaagcagatgacctcagaaagcatcttttgtaagcaa
gtgaggacggaagagaaggagaggagagatgaagaccctgagaggggggacgaagagaga
gaaagacgatacagagaaagaaagctgcagtacggcgacagcaaagacaatcctctgaag
tactggctgtataaagaagaaggtgaaaagagacacaggaagcagaaagagccagatcga
gagaggaaacacagagaaaaaagcagcacaagggaaagaagagaaaagtacccaaaagaa
aagagcgattccttctctggcaaggaaggggaagaaagacacaaggaaaagcgacacaag
gaaggctttcattttgatgaagagaggcgccaaggtgacatggataaaaaagagaggttg
tcgagagaagagcttaagaaaagggagtccaagagcagtgagcaccggcgtcggggcgca
agttcgcgacgagaccccaccagcagccgggaaggaccgtgcgctctctggtatgcagag
aatttagtaagaaataatgaaaaagataaagactcaagagggaagcacagccgcgaagag
ggtgccttggtgtggaagctggccccgaagtgtgggagagaagaaacggcggaagtggaa
aaggaagactttgattcagaaagtgctggaggagatgaatatacagcttgttttgaggat
gattttgaagactatgaagatgactttgaggtttgtgatggagatgatgacagctctgac
gagctgggagcaagagagaagatcgaagagcttcctctggccagaaaaaaggagatacaa
gaagttcagaaagccattaatgcagaaaatgaaagggtcagcgaattgtcctgcagactg
gctcagaagcagggtccgctggagggtgagagggacttgaagacaggtgcgaacagttcc
cctgccagaacccccgtctgtggaattttcgttgattttgcctcagcctcacaccgtgag
aagagtcggactcgggcccttaagcaaaagatgcgcagtacaaggttgcttcggctcctt
gacttggatttttcgttcactttctctctcttggatctgcctccagtgaatgaatatgac
atgtatatcagaaacttcgggaaaaaaaataccaagcaggtctacgtccagtacaacgag
gatgctgtggacagagacgtccagactgaggagatagagacccgaggggtgtggacccag
caccctgccgagggcgccacagtgtcaggcgggagtgggagcggagagctctgtgacgtg
gccaccgcactgaaggtcgacacaccccggctgtccagcttcctccgggcggcctgccag
gtgattgcggttctgcttgaagaggaccgtgtgggacccgagcccggctggagccctggg
acgcaggacggcaccctgcccgtcagtgacaggtcctcacagctgaacgccagcctgccg
ttccttcagagtaagggctgctctgcgggtgtgttggtgcggacagagcactctttactg
ttgcctcccgtgtccctgtcgcggggcttcccgacccggcctccgtggccctctgaaggg
caagatcggacagtgttgtgcttatgtgcctgtcaggggcagagacagacggtggtgtct
gtgcacgggcttcctggagccccgttcgcccccgctctggacggcagatacgtactgtgc
gtgtgggatatctggcagccttcggggccccagaaggtgctgatatgcgagtcgaaggtc
acatgttgctgctttagcccttttaaagcctttttactgtttgctgggaccgtgcacggc
tcggtggtcgtgtgggacctacgagaagactccggaatacatcgttatgtgaagctgggc
gattgcttctggacattcaggacagcaacattttctactgacggcatcctgacctccgta
aaccactgcagtcctgttcaagcggtggaacctgtctccacacctgtctacaggaaacag
agttttgtgctttcccccttttctactcaagaagagatgtcaggtttgtcattccacgtc
gcttccctggatgaaagtggggttctcaatgtgtgggtggtggttgaattaccgaaggca
gacattgcaggctcagtaagtgacttaggtttgatccctggagggagggtaaagctggtg
cacagtgctgtggttcggctgagcgacggcctttcccatacgtgctttgaattctggggg
gccatgcagaccctgaatgtgaagtttctgccttcagaccctagccgcttcattgttggc
acagacgtgggtctcataagtcatggcaccagacaagatttgaaagtgtctcccaaattg
tacaaaccccagcaacccggtatgagaccagtcaaagtgaatgtgattgatctttcacca
tttggagaaccagtattcttggccggctgctcagacggaagcatcaggttgcaccagctg
acctccgagcgccctctccttcagtgggatggcagcaccgacggccacgcggtcataggc
ctccactggtccttgaccagacctgccgtgtttctggcccaggatgacacgtcctgtatt
tatgtctgggatctgctggaaagcgatctgggtcctgtagccaaacagctcgtctcccca
gacaggctggtggccatgacagtcgtgggtgaagccgagaaggccaacggcagcttcctg
gccctggtgctggccagagcctctggccgcatggacgtccagtacctgaagaggacgtgg
gcagcccccgtggcagacgagctgaggaagctgcagctgctcctgcgggaagccctgtag
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