Lutra lutra (Eurasian river otter): 125080635
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Entry
125080635 CDS
T08100
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125080635
Membrane trafficking [BR:
llv04131
]
Protein recycling
Others
EARP complex
125080635
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
125080635
NCBI-ProteinID:
XP_047550515
LinkDB
All DBs
Position
11:37149600..37278285
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AA seq
961 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPENLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCSGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSATSASEGSN
MGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISRLM
QVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSILQL
HEFKFMEQSRSPSVSPSKQPASTSSKTVTLFEQYCSDGNPFEIQANHKDEETEDVLASNG
YESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLNKVN
APILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLEST
GLGLSSSRLRTTLNRIQESLIDMEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGDTL
YGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIYWI
VAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIPLPV
SNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKEFV
ETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDIDRPK
R
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaataaaatctcttatgacccgacagggtctgaaaagccctccagaaaacctt
agtgatcttggtgccattgagagtctccgggtccctggaaaggaggaatttcgagaactt
cgagaacagcctagtgaccctcaagctgaacaagaattaattaatagtattgaacaagta
tatttttctacggactcatttgatattgttaaatatgagctggagaaactccctcctgtt
ctcaatttgcaagaattagaggaatacagagacaaattgaaacaacagcaagctgcagtc
tctaaaaaagtagctgatttaattcttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattacagacaggtcttcagttagctgctgttatctgcacaaatgggagg
agacacttgaatattgccaaggaaggttttactcaagctagtttaggacttcttgcaaat
caaaggaaacgtcagttactgattggacttctgaaatctctaagaactataaaaacattg
caaagaacagatgtgcgcttaagtgaaatgctagaggaggaagactatcccggagctatt
cagttgtgcctggaatgtcagaaagccgccagcacttttaaacattacagttgcataagt
gaattgaattcaaagcttcaagatactttagaacaaattgaggaacagttggatgttgct
ctttccaaaatctgcaagaattttgacattaaccattacaccaaggttcagcaggcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcacatgcacttcactcaagcc
attcataatactgtgtttcaagttgttcttggttacgtggaactatgttcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacccatgttacaccagacagc
tatattccatgccttgctgacctgtgcaaagcactgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaagcacgacagtgctacttctgcttctgaagggagtaat
atgggtactgaagaaactaatttcgatcgtggctacataaaaaagaaattagaacatgga
cttacacgaatatggcaggatgttcagctaaaagtaaaaacctacttgcttggaacagat
ttgtctatatttaaatatgatgatttcatctttgttttggatataatcagcaggttgatg
caagttggagaagaattttgtggtagcaaatctgaagttttacaagagtccattagaaaa
cagagtgtcaattattttaagaactaccatagaacacggcttgacgaactgagaatgttt
ctagagaatgagacctgggagctttgtcctgtgaagtcaaatttcagtatcttgcaactt
catgaatttaaattcatggaacagtcacgttccccatcagtttcccctagtaagcagcca
gcctcaacatcctcaaaaacagtgaccttgtttgagcagtactgtagtgatgggaatccg
tttgaaattcaggccaaccacaaagatgaagaaacagaagatgtcctggcttctaatggg
tatgaatctgatgaacaagaaaaaagtgcttatcaggagtatgacagtgacagtgacgtt
cctgaggaactgaaacgagattatgtggatgagcaaacaggtgatgcacctgtgaaaagc
gtttctagagaaactctaaaaagcaggaagaagtcagattatagtctaaataaagtgaat
gcacccatcttaacaaatacaacattgaatgtaataagacttgttggtaaatacatgcag
atgatgaacattcttaagccaattgcctttgatgttatccacttcatgtctcagctattt
gattattacttgtatgcaatatataccttttttggtcggaatgattcgctggaatcaaca
ggactgggccttagtagtagtagactaagaacaactcttaacagaatacaagaaagcctt
attgatatggaagtttcagctgatcctactgccaccctcacagcagcagaagagagaaag
gagaaagtgccaagcccacacctcagtcacctggtggttttgacatctggggatacgttg
tatgggctggcagaaagagtggtagccacagaatccttggtattcttggctgaacagttt
gagttccttcaaccccatctggatgccgtgatgcctgcagtcaaaaagccctttcttcag
cagttttattctcagacagtctcgactgccagtgaactacgcaaaccaatttattggatt
gtagccggtaaagctattgattatgaacagatgctgctcctgatggctaatgtgaagtgg
gacgtaaaagaaattatgtcacagcacaacatctatgtagatgcactgctgaaggaattt
gagcagtttaacaggaggttaaatgaggtttctaagagagttcggatacccctgcctgtg
tctaatatactttgggaacactgtatacggctggccaacagaactattgtggaaggatat
gccaacgtcaagaagtgtagtaatgagggtcgtgccttgatgcaattggattttcaacag
tttttaatgaaacttgaaaaactaacagatattagacctattcctgataaagaatttgtg
gaaacctatattaaagcctactatctaaccgagaatgacatggaacgctggatcaaagag
cacagggagtattcaacgaagcagctgaccaatctggtaaatgtttgcctgggatcccat
atcaataagaaagcaagacaaaaacttctagctgctatagatgatatagacagacccaaa
agataa
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