Lutra lutra (Eurasian river otter): 125080829
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Entry
125080829 CDS
T08100
Name
(RefSeq) contactin-associated protein-like 2 isoform X1
KO
K07380
contactin associated protein-like 2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125080829
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
llv04990
]
125080829
Domain-containing proteins not elsewhere classified [BR:
llv04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
125080829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
COLFI
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
125080829
NCBI-ProteinID:
XP_047550904
LinkDB
All DBs
Position
11:99643694..101603576
Genome browser
AA seq
1331 aa
AA seq
DB search
MVAAPRAGCGAALSLWMLSSLLCRAWTAPAASQKCDEPLVSGLSHGAFSSSSSMSGSYSP
GYAKINKRGGAGGWSPSDSDHYQWLQVDFGNRKQISAIATQGRYSSSDWVTQYRMLYSDT
GRNWKPYHQDGNIWAFPGNINSDSVVRHDLQHPVIARYVRIVPLDWNGEGRIGLRVEVYG
CSYWADVINFDGHVVLPYRFRNKKMKTLKDVIALKFKTSESEGVILHGEGQQGDYITLEL
KKAKLVFSLNLGSNQLGPIYGHTSVTTGSLLDDHHWHSVVIERQGRSINLTLDRGVQHFR
TNGEFDYLDLDYEITFGGIPFSGKPSSSGRKNFKGCMESINYNGINITDLARRKKLEPSN
VGNLSFSCVEPYTVPVFFNATSYLEVPGRPNQDLFSVSFQFRTWNPNGLLLFSQFADNLG
NVEIDLTESKVGVHINVTQTKMSQIDISSGSGLNDGQWHEVRFLAKENFAILTIDGDEAS
AVRTNSPLQVKTGEKYFFGGFLNQMNNSSHYVLQPSFQGCMQLIQVDDQLVNLYEVAQRR
PGSFANVSIDMCAIIDRCVPNHCEHGGKCSQTWHSFQCACEETGYSGATCHNSIYEPSCE
AYKHLGQTSNYYWIDPDGSGPLGPLKVYCNMTEDKVWTIVSHDLQMQTTVVGYSPEKYSV
TQLVYSASMDQISAVTSSAEHCEQYVSYFCKMSRLLNTPDGSPYTWWVGKANEKHYYWGG
SGPGIQKCACGIERNCTDPRYYCNCDADYKQWRKDAGFLSYKDHLPVSQVVVGDTDRQGS
EAKLSVGPLRCQGDRNYWNAASFPNPSSYLHFSTFQGETSADISFYFKTLIPRGVFLENL
GNTDFIKLELKSATEVSFSFDVGNGPVEIVVRSPSPLNDDQWHRVTAERNVKQASLQVDR
LPQQIRKAPTEGHTRLELYSQLFVGGAGGQQGFLGCIRSLRMNGVTLDLEERAKVTSGFK
SGCSGHCTSYGANCENGGRCLEKYHGYSCDCSHTAYDGTFCNKDVGAFFEEGMWLRYNFQ
TSGVSSKESGVRSDSSPDQQSAPADLAHEGIRFSFSTSKAPCILLYVSSFTTDFLAVLIK
PTGSLQIRYNLGGTREPYNIDVDHRNMANGQPHSVNITRHERTIFLKLDHYPSVSYHLPS
SADTLFNSPKSLFLGKVIETGKIDQEIHKYNTPGFTGCLSRVQFNQIAPLKAALRQTNAS
AHVHIQGELVESNCGASPLTLSPMSSATDPWHLDHLDSASADFPYNPGQGQAIRNGVNRN
SAIIGGVIAVVIFTILCTLVFLIRYMFRHKGTYHTNEAKGAESAESADAAIMNNDPNFTE
TIDESKKEWLI
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggctccgcgagccggctgcggggcagcgctgtcgctctggatgctcagcagc
ctcctctgcagagcctggacggccccggccgcgtcccaaaaatgtgatgaaccgcttgtg
tctgggctctctcatggagctttcagcagctcatcgtccatgtctgggagctattctccg
ggctacgccaagatcaacaagcgagggggtgctgggggatggtctccatccgacagtgac
cattatcaatggcttcaggttgactttggcaatcggaagcagatcagtgccattgcaacc
caaggaagatacagcagctcagactgggtgacccagtaccgcatgctgtacagtgacact
gggagaaactggaagccctatcatcaggatgggaacatctgggcatttcctgggaacatc
aactctgatagtgtggttcgtcatgatttacagcatccagtgatcgcccgctatgtgcgc
atcgtgcccctggactggaatggagaaggccgcattgggctcagagttgaggtctatggc
tgttcttactgggccgatgttatcaactttgatggccacgttgtgttgccatatagattc
agaaacaagaagatgaagaccctgaaggatgtcattgctttgaaatttaaaacctctgaa
agtgaaggggtgatcttgcatggggaaggacagcaaggggattacattaccctggaactg
aaaaaagccaagctggtcttcagcttaaacctaggaagcaatcagctcggccccatctac
ggccacacgtccgtgacgactggaagtctgctggatgatcaccactggcactccgtggtc
attgagcgccagggccggagcattaacctcaccctggacaggggcgtgcagcacttccgc
accaacggagagttcgactacctggacctggactacgagataacctttggaggcatacct
ttctctgggaagccaagttccagtggtagaaagaacttcaaaggctgcatggaaagcatt
aattacaatggtatcaacataactgatctcgcaagaaggaagaaactagagccctcaaat
gtgggaaatttgagtttctcgtgtgtggagccctacacagtgcctgtctttttcaatgct
accagttacctggaggtaccaggacgacctaaccaggacctgttttcagtcagtttccag
ttcaggacttggaacccaaatggtctcctgcttttcagtcagtttgcagataatttgggc
aatgtggagattgacctcacggaaagcaaagttggtgttcacatcaatgtcacgcagacg
aagatgagccaaatagatatctcttcaggttctggactgaatgacggacagtggcatgaa
gttcgtttcctagctaaggaaaattttgccattctcaccatcgatggggacgaggcttca
gctgttcgaactaatagtcctcttcaagttaaaactggcgagaagtacttttttggaggt
tttctgaaccagatgaataactccagtcactatgtccttcagccttcattccaagggtgc
atgcagctcatccaagtggatgaccaactggtgaatttatatgaagtggcacagaggagg
ccggggagttttgcgaacgtcagcatcgacatgtgcgccattatagacagatgtgtgccc
aatcactgtgagcatggcgggaagtgttcgcaaacatggcacagcttccagtgcgcttgt
gaggagacgggatacagtggggccacctgccacaactcgatctatgagccttcctgtgaa
gcctacaaacacctgggccagacgtccaattactactggatagatcctgatggcagtgga
cctctggggcctctgaaagtctactgcaacatgacagaggacaaagtgtggaccatagtg
tctcacgacttgcagatgcagaccacggtggtgggctacagcccggagaagtactcggtg
acacagctcgtgtacagcgcctccatggaccagatcagcgccgtcaccagcagcgcggag
cattgcgagcagtacgtctcctatttctgcaagatgtcgaggttgttgaacaccccagat
ggcagcccttacacctggtgggttggcaaagccaatgagaagcactactactggggcggc
tccgggcctggcattcagaagtgcgcctgcggcatcgagcggaactgcacagaccccaga
tactactgtaactgtgatgcggattataagcagtggaggaaggacgctggcttcttatcc
tataaagaccacctgccagtaagccaggtggtagttggagataccgaccggcaaggctca
gaagccaaactgagcgtgggccccctgcgttgtcaaggagacaggaattactggaatgct
gcttccttcccaaatccgtcatcctacctgcacttctctactttccaaggggaaactagt
gccgacatttctttctacttcaaaacgttaatcccccggggagtgtttctggaaaatctg
ggcaacacggatttcatcaaactggagctgaaatctgccaccgaagtgtccttttcgttt
gatgttggaaatgggccggtggagattgtggtgcggtcgccctcccctctaaatgacgac
cagtggcaccgggtcaccgcggagaggaatgtcaagcaagccagcttacaggtggatcgg
ctgccgcagcagatccgcaaggcacccacagaaggtcacacgcgcctggagctctacagc
cagctctttgttggtggcgccgggggccagcagggcttcctcggctgcatccgctccctg
aggatgaacggggtgacgctggacctggaggaaagagcgaaggtcacgtccggcttcaaa
tccggctgctcgggccactgcaccagctacggggccaactgtgagaacggaggcaggtgt
ctagagaaataccacggctactcctgcgactgctcacacacggcctacgatggcacattt
tgcaacaaggatgttggcgcattttttgaagaggggatgtggctacggtataacttccag
acatcgggggtcagcagcaaagaatcgggcgtcaggtcagacagctcccctgatcagcag
agtgcccctgccgacctggcacatgaggggatccgcttcagcttcagtacctccaaggcg
ccctgcattctcctctacgtgagctccttcacgacagacttcttggcagtgctcatcaaa
cccaccggaagcttacagattcggtacaacctgggcggcaccagggagccctacaacatt
gatgtagatcataggaacatggccaatggacaaccccacagcgttaacatcacccggcac
gagaggaccatatttctcaagctcgatcactatccttctgtgagttaccatctgccaagc
tcggctgacacactgttcaattctccgaagtcgctctttctaggaaaagttatagaaaca
gggaagatcgaccaagagattcacaaatacaacaccccgggattcactgggtgcctctcc
agggtccagttcaaccagattgcgcctctcaaggcagccttgaggcagacgaacgcctca
gcccacgtgcacatccagggtgagctggtggagtccaactgcggagcctccccgctgacc
ctctcccccatgtcgtccgccaccgacccctggcacctagatcacttggattcagccagt
gctgattttccatataatccaggccaaggtcaagctataagaaatggagtcaacagaaac
tcggctatcattggaggggtcatcgctgtggtgattttcaccattctctgcaccttggtc
ttcctcattcgctacatgttccgccacaagggcacctaccacaccaatgaagcaaaggga
gcagagtctgcagagagcgccgacgccgccatcatgaacaacgaccccaatttcacagag
accattgatgagagcaaaaaggaatggctcatctga
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