Lutra lutra (Eurasian river otter): 125081020
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Entry
125081020 CDS
T08100
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03018
RNA degradation
llv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125081020
09123 Folding, sorting and degradation
03018 RNA degradation
125081020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125081020
03041 Spliceosome [BR:
llv03041
]
125081020
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125081020
mRNA degradation factors
5'-3' decay
Lsm complex
125081020
Spliceosome [BR:
llv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
125081020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
125081020
NCBI-ProteinID:
XP_047551353
LinkDB
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Position
11:76629909..76637209
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AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgccttggaaaactacatcaaccgaactgttgcagttataacttctgatgga
agaatgattgtgggaacactgaaagggtttgaccagaccattaatttgattttggatgaa
agccatgaacgagtgttcagctcttcacagggagtagaacaagtggtgctggggttatac
attgtaagaggtgacaatgttgcagtcattggagaaattgatgaagagacagattctgca
cttgacttggggaatattcgagcagaacctctaaactctgtggcacactga
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