Lutra lutra (Eurasian river otter): 125081214
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Entry
125081214 CDS
T08100
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04145
Phagosome
llv04814
Motor proteins
llv04962
Vasopressin-regulated water reabsorption
llv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125081214
09142 Cell motility
04814 Motor proteins
125081214
09150 Organismal Systems
09155 Excretory system
04962 Vasopressin-regulated water reabsorption
125081214
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125081214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125081214
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
llv04812
]
125081214
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
125081214
Cytoskeleton proteins [BR:
llv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
125081214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WDR55
Dynein_IC2
Beta-prop_EML
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
EIF3I
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_RFWD3
CFAP43_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
125081214
NCBI-ProteinID:
XP_047551715
LinkDB
All DBs
Position
11:39451104..39753070
Genome browser
AA seq
628 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEADMQQKKEPVQDDSDLDRKRRETE
ALLQSIGISPEPPLVPTPMSPSSKSVSTPSEAGSQDSGDLGPLTRTLQWDTDPSVLQLQS
DSELGRRLHRLGVSKVTQVDFLPREVVSYSKETQTPLATHQSEEDEEDEEMVEPKVGHDS
ELENQDQKQEVKEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAEDSDIFFDYSG
RELEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQYPELMVASYNNNEDAPHEP
DGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTP
VQRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKS
KPVAVTGMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVG
PIDFSHLFVTSSFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVHPALFACVDGMGRL
DLWNLNNDTEVPTASVAIEGASALNRVRWAQGGKEVAVGDSEGRIWIYDVGELAVPHNDE
WTRFARTLVEIRANRADSEEEGTVELSA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgacttaaaagctgagctagaacgcaaaaaacagcgcttagcacag
ataagagaagagaagaaacggaaagaagaagagaggaaaaagaaagaggctgatatgcag
caaaagaaagaacctgttcaggacgactctgacctggatcgcaaacgcagagagacagag
gctcttttgcaaagcattgggatatcaccggagccccctctagtcccaacccctatgtct
ccctcctcgaaatcagtgagcactcctagtgaagctggaagccaagactcaggagacctg
ggaccactaacaaggaccctgcagtgggacacagacccctcagtgctccagctgcagtca
gactcagaacttgggcgaagactgcacaggctgggtgtgtcaaaggttacccaagtggat
ttcctgcccagggaagttgtgtcctactccaaggagacccagactcccctagctacacat
cagtctgaagaggatgaggaagatgaggaaatggtagagcctaaagttggccatgattca
gaactggaaaaccaagaccaaaaacaggaggtgaaggaagcccctccacgagagctgaca
gaggaagaaaaacagcagatccttcattcagaggaattcctcatattttttgatcggaca
atccgggtaattgaaagagcactggcagaagactccgacatcttctttgactacagcggt
cgagagttagaggaaaaagatggggatgtccaggctggagcgaacctttctttcaatcgt
cagttctacgacgagcattggtccaagcatcgagtggtcacttgtatggactggtctctc
cagtaccccgagctgatggttgcttcctacaacaacaacgaggacgctccccatgaacca
gatggcgtggctttggtttggaacatgaagtttaagaaaaccacaccagaatacgtcttc
cactgtcagtcctctgtgatgtctgtgtgcttcgctcgtttccatcccaacttggtggtt
ggtgggacttactcgggccagattgtcctgtgggataatcgcagtcatcgaaggacacca
gtgcagaggacacctttgtcagctgctgcacacacacatcccgtgtactgtgtaaatgtt
gtggggacccagaatgctcataacctcatcaccgtctctactgatggcaaaatgtgctcc
tggagcctggacatgctctcgacgccgcaggagagcatggagctggtgtacaataagtcc
aagcctgtggctgttaccggaatggctttcccgacgggagacgtcaataacttcgtggtt
ggcagtgaggagggcacagtctacacggcctgtcgtcatggaagcaaagcgggtattggg
gaggtcttcgaaggtcatcagggaccagtgactggaattaactgccacatggctgtgggc
cccatcgacttttcacacctgtttgtcacgtcgtcatttgactggactgtcaaactatgg
accacaaagcacaacaagccgctctactcctttgaagacaatgcagactatgtgtacgat
gtcatgtggtcccccgtgcatcccgcgctctttgcctgcgtggacggaatggggcgcctg
gacctctggaacctcaacaatgacaccgaggttccaacagcaagtgtggccattgagggg
gcttccgccctgaaccgggtacgctgggctcaaggtggcaaagaagttgctgttggagac
tcagaaggccgtatttggatctacgacgttggagagcttgcagtcccccacaatgacgaa
tggacccgcttcgccaggaccctcgtggagattcgcgctaacagagctgacagtgaggag
gaaggcaccgttgagttatctgcctag
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integrated database retrieval system
