Lutra lutra (Eurasian river otter): 125081309
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Entry
125081309 CDS
T08100
Name
(RefSeq) laminin subunit beta-4-like isoform X1
KO
K06245
laminin, beta 4
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04151
PI3K-Akt signaling pathway
llv04510
Focal adhesion
llv04512
ECM-receptor interaction
llv05145
Toxoplasmosis
llv05146
Amoebiasis
llv05165
Human papillomavirus infection
llv05200
Pathways in cancer
llv05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125081309
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125081309
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125081309
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125081309
09162 Cancer: specific types
05222 Small cell lung cancer
125081309
09172 Infectious disease: viral
05165 Human papillomavirus infection
125081309
09174 Infectious disease: parasitic
05146 Amoebiasis
125081309
05145 Toxoplasmosis
125081309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB1
LAMB4
CENP-F_leu_zip
Csx1_CARF
Motif
Other DBs
NCBI-GeneID:
125081309
NCBI-ProteinID:
XP_047551806
LinkDB
All DBs
Position
11:16998207..17098741
Genome browser
AA seq
1792 aa
AA seq
DB search
MQFQLAFFLHLGLFSYTKAHDECKRGSCHPTTGDLLVGRSAQLTASSTCGLDGAQKYCIL
SYLEGEQKCFICDSRFPYDPYSASLSHTIENVITSFEPERGRKWWQSENGLDHVSIRLDL
ETLFQFSHLILTFKTFRPAAMLVERSTDYGHTWKVLKYFAKDCAASFPNISSGQAQAVGE
LVCDSKYSDIEPSTGGEVVLKVLDPSFEIANPYSPYIQDLVTLTNLRINFTKLHALGDTL
LGRRENESLGNYYYALYKMVVRGSCFCNGHASECGPAQKVRGDVFSPPGMVHGRCVCQHN
TDGPNCERCRDFFHDAPWRPGAGHQDSTCRACHCNSHSDRCHFDMTAYVRSGSHSGGVCE
DCRHNTEGQHCDRCRPLFYRDPLKAMSDPYACIPCECDPDGTLSGGMCVSQSDPALGTVA
GQCLCKENVEGAKCDRCKPNHHGLNATDPMGCQPCDCTPFGSLPLSACDADTGRCLCQTF
ATGPHCEECTAGYWGLEDGLHGCSPCDCDIGGAYSNVCSPKDGQCECRPHVTGRRCTEPA
PGYFFAPLNFYLYEAEEATPLEGLAPLVLATALPTCDVYFQQQGSDFTVDKGSIILKSNQ
KQSVRADKRSEGSVTFGQVPAFHVVFREQVPGTPVTWTGPGFARVLPGAGLRFVVSNISL
PMDFTIALCYEPQPAADWTVQVLVKPLGGSKHCPRESPWPRPLSFPLPAASRIVLLPTTI
CLEPDVQYSIDVHFSRPLEGGSHAQSHILVDSLGLIPQINSLENFCSKRDLDEYQLHSCV
EIASKTGPQVLPDVCERLIVSMSARLHNGAVACKCHPQGSVGPSCSRLGGQCPCKPHVAG
RCCDRCSPGSYGLGHHGCHPCHCHPQGSKSPICDQITGQCSCQGEVAGRRCDRCLEGYFG
FPSCRPCLCNGFAELCDPETGSCFNCGGFTTGRNCERCIDGYYGNPPLGQSCRPCRCPDV
PSSSQYFAHSCYQHPWSSDVICNCLQGYAGKQCGECSAGFYGNPRIPGAPCQPCACSNNT
DVTDPESCSRLTGECLRCLHNTQGPHCQFCKPGHFGSAINQTCQRCSCHPSGVNPAECPP
GRGACLCDPDTGTCPCLPNVTGRACDRCADGYWNLVPGRGCQPCDCDPQTSHGGHCDQLI
GQCPCKLGYDGKLCSECKEDYYRDPLGRCIPCDCNREGTQKPTCDRDTGTCRCQEGVSGP
RCDRCARGHGREFPACLRCHGCFDPWDHTVSALSEAVRGLMRLAASMRDKREPVRVCEAD
FKGLRENLSEIERILKHPVFSSGEFSTVKDYQDSVREQIMQLSVQMKAVREFPDLKERIG
RRRNEADLLLEELRQEIGLRSHARSASITTDSSEDIKKHYQTSSSAEKKSNETISIIKNS
EKNRNNLLTIFDTLTSKQNSSLEKLKQIMVPDIQRLKEKVCGDPGDMPCVLSSCDGPSCR
GSPPLSSDALQQAQEAESAIRNLSDQVQGWKNQLKNVSKLAEISKNSALQLNEKLRNMKN
QSESEEEKMNLLIKKLKTFLSEENVPPEDIEKVANRVLDVHLPMTSQNLTHELDKVWKLV
QLCEDYGADEDRLHKAAKEAQKVLVKAEDAEKAANVLLNLDKTLNELQQVQVTQGWVNST
ITQLTAAIKKIKENALQAEKKAKHTKNELDLAKQSSVLEDRLSGLQTKLQRNREQAARVT
TQAASAQHQAGDLKQEFAELRNQYAALQHKTGAIGLTKVTLEKVEQLKGAVEKLTTDTVD
KIRRIADLEKKIQDLHLSRQEKAEQLKQLEDQVVAIKNEIVEQGNQYATCYS
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttcaactggccttttttttgcaccttgggttgttcagttacacgaaagcccac
gatgaatgcaaaaggggctcctgtcaccccaccaccggtgatctcctggtgggtcgcagc
gcacagctcacggcttcttctacctgcgggctggacggagcccagaaatactgcatcctc
agctaccttgagggggagcaaaaatgcttcatctgcgactcgagatttccatacgacccc
tactccgcatccctcagccacaccattgagaatgtaattacaagttttgaaccagagaga
ggaaggaaatggtggcaatctgagaacggtcttgatcatgtcagcatcagattggaccta
gagacattatttcagttcagccacctcattctgaccttcaagacttttcggcctgctgcg
atgttagtcgaacgttccacagactatggacacacctggaaagtactcaaatattttgcg
aaagactgtgccgcttcctttccaaatatctcttcgggccaggcccaggcagtgggagaa
cttgtttgtgactctaaatattcggatatcgaaccctccactggtggcgaggtcgtttta
aaagttctggatcccagctttgaaattgcaaacccttacagcccctacatccaggacctc
gtgacattaacaaatctgaggataaactttaccaaactccatgccctgggggacactttg
ctcggaaggagggagaatgagtccctggggaactactactacgctctgtataagatggtg
gtgcggggcagctgtttttgcaatggccacgccagcgagtgtggcccggcgcagaaggtg
cggggagacgtgttcagccctcccgggatggttcacggtcgctgcgtctgtcagcacaat
acagacggcccaaactgtgagaggtgcagggacttcttccacgacgccccgtggaggccc
ggagcaggccaccaggacagcacgtgcagagcttgtcactgcaatagccactctgaccgc
tgtcacttcgacatgactgcgtatgtgaggagtggcagccacagcgggggcgtgtgcgaa
gactgccgccacaacaccgaggggcagcactgtgaccgctgcagacccctcttctacagg
gacccactcaaggccatgtctgatccgtacgcctgcatcccctgtgaatgtgatccagac
gggaccttatcaggtggcatgtgtgtgagtcagtctgatcctgctttggggactgtggcc
ggccagtgcttgtgcaaagagaacgtggaaggagccaagtgtgaccggtgcaagcccaac
caccacgggctgaacgcaacggaccccatgggctgtcagccctgtgactgtacccctttc
gggagtcttcccctctcagcctgcgatgcggacacggggcggtgcttgtgccagacgttt
gccacaggaccacactgtgaagaatgcactgctggatactggggactggaagatggcctc
cacggctgttctccctgcgactgcgacattggaggtgcttattccaacgtgtgctccccc
aaggatggacagtgtgaatgccgcccgcatgtcaccggccgccgctgcacagaaccggcc
cccggctacttctttgctcccttgaatttctatctctatgaggcagaggaggccacccca
ctggaaggacttgcacctctggtattggcaacagcgttgcctacatgtgatgtgtatttc
cagcaacaagggagcgatttcacagttgacaagggcagtataatactgaagagcaatcag
aagcagagtgtacgtgctgacaagcggagtgagggctcagtgacttttggccaggtgcct
gcctttcacgtggttttccgagaacaagttcctggaacccctgttacgtggactggacct
ggatttgccagagttctccctggggccggcttgagatttgtcgtcagcaacatttccttg
cccatggacttcaccatcgccctttgctacgagcctcagcctgcagccgactggactgtc
caggtcctggttaagccccttggagggagtaagcactgtccacgcgagagtccatggcca
cggcctttgtctttccctttaccggcggcttccagaatcgtgctgctgcccacaaccatc
tgtttagaaccagatgtacaatattccatagatgtccatttttcccggcctttggaagga
gggtcccacgctcagtcccacatcctggttgactcacttggtctgattccccaaatcaat
tcactggagaatttctgcagcaagagagacttagatgaatatcagctacacagctgtgtt
gaaattgcctcgaagacgggaccccaggtgctacctgatgtgtgtgaaaggctgatagtc
agcatgtccgccaggctgcacaacggggcagtagcctgtaagtgtcacccccagggctca
gtggggcccagctgcagccgacttgggggccagtgcccatgcaagcctcatgtggctggt
cgctgctgtgacaggtgctcaccaggaagctacggcttgggacatcatggctgtcaccca
tgtcactgtcatccgcaaggctcaaagagccctatatgtgaccaaataacgggacagtgc
tcctgccagggggaggtggccggccgccgttgtgaccggtgcctggaaggctactttggg
ttccccagctgccgcccttgcctttgtaatggattcgcggaactttgtgatcccgaaaca
ggctcatgcttcaattgtggggggtttacaactggaagaaactgtgaaagatgcatcgat
ggttactatgggaatcctcctttgggacagtcctgccgtccttgccgatgtccagacgtt
ccctcgagtagccagtattttgcccattcctgttatcagcatccttggagctcagatgtg
atctgcaattgtcttcagggttatgcaggtaagcagtgtggagaatgctctgcaggtttc
tacggaaatcccagaattccgggagcgccttgccagccgtgtgcctgcagcaacaacacc
gacgtgacggaccctgagtcctgcagccggctgacaggggagtgcctgaggtgtttgcac
aacacacaggggccccactgccagttctgcaaaccaggtcactttggatcggccatcaat
cagacctgccagaggtgctcctgccatccttctggggtgaatcccgctgagtgtccccct
ggtcggggagcttgcctctgtgaccctgacaccggcacatgcccttgtctgcccaacgtc
acgggccgggcctgtgaccgttgtgccgatggatactggaatcttgtccccggcagagga
tgccagccatgcgactgtgacccccagacctctcacggcggccactgtgaccagcttata
ggccagtgtccgtgtaaattaggctatgatgggaaactgtgcagcgagtgcaaggaagat
tattaccgtgatccactggggcgatgcattccatgtgactgcaacagggaaggtacccag
aagcccacctgtgaccgggacacgggcacgtgccgctgccaggagggggttagcggccca
cgatgcgatcgctgcgcccggggtcacggccgggaattccctgcctgtcttcggtgtcac
ggctgctttgatccctgggaccacacggtttctgccctctccgaagcggtgcgagggtta
atgaggctggccgctagcatgcgagataaaagagagcctgtgcgggtctgtgaggccgac
ttcaaaggcctcagagagaacttgtctgaaatagaaaggattctgaaacatcctgttttc
tcatcgggggaattctcaaccgtcaaggattatcaggactctgttcgggaacaaatcatg
cagctaagtgtgcaaatgaaagctgtgcgtgagtttccagatctgaaagaaaggataggg
agaaggaggaatgaagcagacctcttacttgaagaacttcggcaagaaatcggtttgcgc
tcccatgcccgcagcgcaagcatcaccacggattcctcagaggacatcaagaagcattat
cagacgtcatcatctgctgaaaagaaaagtaatgaaaccatttctatcataaaaaactct
gaaaaaaacagaaacaacttacttaccatctttgatacgctaacctcaaaacagaactcg
tcattggaaaaactaaagcagattatggtaccagatatccagagactgaaagaaaaggtg
tgtggagacccaggggacatgccatgcgtgctctcatcctgtgatggccccagctgtcgt
ggctccccacccctctcaagcgatgccctccagcaagctcaggaggcagagtctgcaatt
cgtaatttgagcgaccaggttcagggttggaagaaccagctcaaaaatgtaagtaaactg
gcagaaatctccaaaaacagtgccttacagctaaatgagaaactgagaaatatgaaaaat
caaagtgaatctgaagaagagaaaatgaatctcttaatcaaaaaactgaaaacatttttg
tcagaggaaaacgtgcctccagaggatatagagaaggttgcaaatcgcgtacttgatgtc
catctacccatgacatcgcagaatctaacccatgaacttgacaaagtgtggaagctggtg
cagctctgtgaggactacggggcagatgaagacaggctacataaagcagccaaggaagcc
cagaaggttttggtgaaggcagaagatgctgaaaaagcagcaaatgttctattaaatctt
gacaaaacgctgaatgagttgcaacaagttcaagtcacccaaggatgggtaaactctacc
attacacagctgacggcggcgatcaagaaaattaaagagaacgcactacaggctgaaaag
aaagccaagcacaccaagaatgagctcgacttagcaaagcagtcgtcagtgctggaggac
aggctctccgggctgcagaccaagctgcaaaggaacagagagcaagctgcccgcgtgacc
actcaggccgcatcggcccaacaccaggctggggacctcaagcaggagtttgcagagctg
agaaaccaatatgctgctcttcaacataagactggtgctataggactgacaaaggtaact
ttggaaaaagtggaacagctaaaaggtgcagtggaaaaactgaccacagatacagtggac
aagataagaagaatagcagatttagaaaagaagatccaagatctgcatctgagtagacaa
gaaaaagcggagcaactgaaacagctggaagatcaagttgttgccattaaaaacgagatt
gtcgagcaaggaaatcaatatgctacttgctatagttag
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