Lutra lutra (Eurasian river otter): 125081310
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Entry
125081310 CDS
T08100
Name
(RefSeq) laminin subunit beta-1 isoform X1
KO
K05636
laminin, beta 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04151
PI3K-Akt signaling pathway
llv04510
Focal adhesion
llv04512
ECM-receptor interaction
llv05145
Toxoplasmosis
llv05146
Amoebiasis
llv05165
Human papillomavirus infection
llv05200
Pathways in cancer
llv05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125081310
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125081310
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125081310
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125081310
09162 Cancer: specific types
05222 Small cell lung cancer
125081310
09172 Infectious disease: viral
05165 Human papillomavirus infection
125081310
09174 Infectious disease: parasitic
05146 Amoebiasis
125081310
05145 Toxoplasmosis
125081310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
CorA
F5_F8_type_C
ATG17_like
Motif
Other DBs
NCBI-GeneID:
125081310
NCBI-ProteinID:
XP_047551810
LinkDB
All DBs
Position
11:17120587..17189270
Genome browser
AA seq
1786 aa
AA seq
DB search
MGLVQVFAFSFLALCGAKVCAQEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHK
PEPYCIVSHLQEDKKCFICNSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVEN
VTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGRTWGVYRYFAYDCESSFPGISTG
PMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFRIEDPYSPRIQNLLKITNLRIKFVKL
HTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVDGVNEEVEGMVHGHCMC
RHNTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCNCNEHSGSCHFDMAVYLATGNVTGG
VCDDCQHNTMGRNCEQCKPFYFQHPERDVRDPNLCERCSCDPAGSQNGGICDSHTDFSTG
LIAGQCRCKLHVEGEHCEICKEGFYGLSAEDPFGCTSCACNPLGTIPGGNPCDSETGYCY
CKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNSCSAESGQCACRPHVIGRQC
NEMESGYYFTTLDHYIYEAEEANFGPGVSIVERQYIQDRIPSWTGAGFVRVPEGAYLEFF
IDNIPYSMEYDIIIRYEPQLPDRWEKAVITVQRPGKIPASSRCGNTIPDDDNQVVSLSPG
SRYVVLPRPVCFEKGVNYTVRLELPQYTSSDSDVESPYTLIDSLVLMPFCKSLDIFTVGG
SGDGLVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQTGLACECDPQGS
LSSVCDPNGGQCQCRPNVVGRTCDRCAPGTFGFGPSGCKPCECHLQGSVHAFCHPVTGQC
QCFQGVYARQCDRCLPGYWGFPSCQPCRCNGHAEDCDAATGACLGCQDYTTGHNCERCLA
GYYGDPIIGSGDHCRPCPCPDGPDSGRQFASSCYQDPVTLQLACVCDPGYIGSRCDDCAP
GFFGNPSDVGGSCLPCQCHHNIDTTDPEACDKETGRCLRCLYHTEGEQCQLCRSGYYGDA
LRQDCRKCVCNYLGTVQQHCNGSDCQCDKATGQCLCLPNVVGQNCDRCAPNTWQLASGTG
CDPCSCDPAHSFGLSCNEFTGQCQCMPGFGGRTCSECQELFWGDPNVECRACDCDPRGIE
TPQCDQSTGQCICVEGVEGPRCDKCTRGYSGVFPDCAPCHHCFALWDAIIAELTNRTQKF
LEKAKALKISGVLGPYRETVDSVEKKVNEIRDILAQSPAAEPLKNIGDLFEEAEKLTKDV
SEKMAQVEVQLLDTASQSNSTASQLESLQTEAESLDNTVKELAEQLEFIKNSDIRGALDS
ITKYFQMSLEAEERVNASTTDPNSTVEQSALTRDRVEDLMMDREAQFREKQEEQARLLDE
LAGKLQSLDLSAAAEMTCGTPPGASCSETECGGPGCRTDEGEKKCGGPGCGGLVTVAHGA
WQKAMDFDRDVLSALAEVEQLSKMVSEAKLRADEAKQNAQDVLLKTNATKEKVDKSNEDL
RNLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVI
LQQSAADIARAEMLLEEAKRASKSANDVKVTADMVKEALEEAEKAQIAAEKAIKQADEDI
QGTQNLLTSIESETAASEETLLNASQRISELERNVEELKRKAAQNSGEAEYIEKVVYTVK
QSADDVKKALDGEVDEKYKKVEKLIAKKTEESADARRKAEMLQNEAKTLLAQANSKLQLL
KDLERKYEDNQKYLEDKAQELVRLEGEVRSLLKDISQKVAVYSTCL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggggctggtccaggtgttcgctttcagtttcttagccctgtgcggagccaaagtgtgc
gctcaagaacccgaattcagctatggctgcgcggagggcagctgctaccccgccacgggt
gaccttctcatcggccgagcacagaagctctccgtgacctcgacgtgcgggctgcacaag
cctgagccgtactgtattgtcagccacctccaggaggacaaaaaatgcttcatctgcaat
tcacaagatccttatcacgagaccctcaatcctgacagtcatctcattgaaaatgtggtc
actacatttgctccaaaccgccttaagatttggtggcaatccgaaaatggtgtggaaaat
gtaacgatccaactggatttggaagcagaattccactttactcatctcataatgactttc
aagacattccgtccggccgctatgctgatagaacgatcgtccgacttcgggagaacctgg
ggcgtgtacagatactttgcctatgactgcgagagctcatttccaggcatctccaccggg
cccatgaagaaagtggatgatataatttgtgattcccgctattctgacattgaaccctca
accgaaggagaggtgatatttcgtgctttagatcctgctttcagaatagaagacccttac
agtccaaggatacagaatctcttaaaaatcaccaacctgagaatcaagtttgtgaagctg
cacactttgggtgataaccttttggattccagaatggaaatcagagagaagtattactat
gcagtgtatgatatggtggttcgaggaaattgcttctgctatggccatgccagcgagtgt
gcacctgtggacggagtgaatgaggaagtagagggaatggttcatgggcactgcatgtgc
aggcataacaccaagggcttgaactgtgaacagtgcatggatttctaccacgacttaccc
tggagacccgctgaaggtcgaaacagcaatgcctgcaaaaagtgtaactgcaacgagcat
tcgggctcatgccactttgatatggcggtgtacttggccactggaaacgtcaccggaggg
gtgtgtgacgactgccagcacaacacgatgggacgcaactgtgagcagtgcaagccgttt
tacttccagcacccggagagagacgtccgagaccccaacctctgtgaacgatgcagctgt
gacccagctggatctcagaatgggggaatctgtgacagtcacacggatttttccactgga
ctcattgctggtcagtgccggtgtaaattacatgtggagggagaacactgtgaaatttgc
aaagaaggcttctacggcttaagtgctgaagacccattcggttgtacatcttgtgcttgc
aatcctctgggaacgattcctggcgggaatccttgtgattctgagacaggttactgctac
tgtaagcgtcttgtgacaggacagcattgtgaccagtgtctgccagagcactggggctta
agcaacgacttggatggatgtcgaccttgcgactgtgaccttggaggggccttaaacaat
agctgctccgcggagtcaggccagtgcgcgtgccgcccccacgtcatcgggcgccagtgc
aacgagatggagtctgggtactactttaccaccttggatcactacatctatgaagcagaa
gaagccaacttcgggcctggggtcagcatagtggagcggcagtatatccaggaccggatt
ccttcctggactggagcaggcttcgtccgagtgcccgaaggggcttatttggagtttttc
attgacaacataccatattccatggagtatgacatcataattcgctacgaaccacagctc
cccgaccgctgggaaaaagctgtcatcacggtgcagcgacctggaaagatcccagccagc
agccgatgcggtaacactattcccgatgatgacaaccaggtggtgtccttgtcgcccggc
tcgaggtacgttgtccttccacgccccgtgtgctttgagaagggtgtaaactacaccgtg
aggttggaactgccccagtacacgtcctccgatagcgacgtggagagtccctacacgctc
atcgattctcttgttctcatgccgttctgtaaatctctggacatcttcaccgtgggaggc
tcaggggatgggctggtcaccaacagcgcctgggaaacctttcagagatacaggtgtctg
gagaacagcagaagcgttgtgaaaacaccaatgaccgacgtatgcagaaacataatcttc
agcatttccgccctgttacaccagacaggcctggcttgtgaatgcgacccccagggctca
ctgagttccgtctgcgaccccaacggaggccagtgccagtgccggccgaacgtggttgga
agaacctgtgacagatgcgctcctggcacctttggctttggccccagtggctgcaaacct
tgtgagtgccacctgcaaggatccgtccacgccttctgccaccccgtcaccggccagtgc
cagtgtttccagggcgtgtatgctcggcagtgtgaccggtgcctgcctgggtactggggc
ttcccgagctgccagccctgccggtgtaacggccacgccgaggactgcgacgcagcgacg
ggggcctgcctgggctgccaggactacaccacggggcacaactgtgaaaggtgcttggcc
ggttactatggcgatcccatcatcgggtctggagatcactgccgcccttgcccttgccca
gacggtcccgacagcggacgccagttcgccagcagctgctatcaggaccctgtgacttta
caactggcttgtgtctgtgatcctgggtacattggctccaggtgtgacgactgtgcccca
ggcttcttcggcaatccctcggatgtggggggctcctgtctgccctgccagtgtcaccac
aacatcgacacgacggacccagaagcctgcgacaaggagacagggaggtgcctcaggtgc
ctctaccacacggagggggagcagtgccagctctgccggtccgggtactatggggacgcc
ctccggcaggactgtcgcaagtgtgtctgcaattacctggggacagtgcagcagcactgc
aacggctctgactgccagtgcgacaaagccacaggccagtgcttgtgtctccccaacgtg
gtcgggcagaactgtgaccgctgtgcgcccaacacctggcagctggccagcggcaccggc
tgtgacccatgcagctgtgatcctgctcattccttcgggctgtcttgcaacgagttcaca
gggcagtgtcagtgtatgcccggcttcggaggccgcacctgcagcgagtgccaggagctc
ttctggggagaccccaacgtggagtgccgagcctgtgactgtgaccccaggggcattgag
acaccacagtgtgaccagtccactggccagtgcatctgtgtcgagggggtcgagggtccg
cgctgtgacaagtgcacgcgagggtactcaggcgttttcccagactgcgctccctgccac
cactgctttgctctctgggatgcaatcatcgccgagttgaccaatcggacccagaagttc
ctggagaaagccaaggccctgaagatcagtggggtgcttgggccataccgagagactgtg
gactcggtggagaaaaaagtcaacgagatcagagatatcctagcccagagccccgccgcg
gagccgctgaaaaacattggggatctctttgaggaagcagagaaattaaccaaagatgtt
tcagaaaagatggctcaggtcgaggtgcagctgttggacacggcttcacaaagcaacagc
acagccagccagctagagtctctgcagacagaagcggaaagcctagacaacacagtgaaa
gagcttgctgagcaattggaatttatcaaaaactcagatattcggggtgccctggacagc
attaccaagtacttccagatgtccctggaggcagaggagagggtgaacgcctccaccacg
gaccccaacagcaccgtggagcagtcggcgctcacccgggaccgagtcgaagacttgatg
atggatcgagaagcccagttccgggaaaagcaagaggagcaggcccgccttctggatgag
ctagcaggcaaactgcaaagtctggacctttcagcggctgctgagatgacctgcgggacg
cccccaggggcctcgtgttccgagacggagtgtggcggcccaggctgcagaacagacgaa
ggcgagaagaagtgtggtgggcccggctgtgggggcctggtcacggtggcacatggagcc
tggcagaaagccatggattttgaccgagacgtcctgagcgcgctggctgaggtggagcag
ctctccaagatggtctctgaagcaaaactgagggcagatgaggccaaacagaatgctcaa
gacgtcctgctgaaaaccaacgccaccaaagaaaaggtggacaagagcaacgaggacctg
aggaatctgatcaagcaaatcaggaactttctgacccaggatagtgcggatctggacagc
attgaagcagtggctaatgaggtactaaagatggagatgcccagcaccccacagcagtta
cagaacttgacagaagatattcgggagcgagtcgaaagcctttctcaagtcgaggtcatt
ctacagcaaagcgctgctgacattgctagagcggagatgttgctggaagaagctaagaga
gccagcaaaagtgcaaatgatgttaaagtcaccgcagacatggtgaaggaagcgctggag
gaagcagaaaaggcccagattgcagcagagaaagccattaagcaggcagatgaagacatc
cagggaacccagaacctgctcacttcgattgagtctgaaaccgctgcttctgaggagacc
ttgctcaacgcctcccagcgcatcagtgagctagagaggaacgtggaagagctgaagcgg
aaggcggcccagaactctggggaggcagaatacattgaaaaagtagtgtacactgtgaaa
caaagtgcagatgatgttaaaaaggctctagatggcgaagtggatgaaaagtataagaag
gtggaaaaattaattgccaaaaaaaccgaagaatccgcagatgccagaaggaaagctgaa
atgctacaaaatgaagcaaaaacacttctggctcaagccaacagcaagctccagctcctg
aaagatttagaaagaaaatacgaggacaatcaaaaatatttagaagataaagctcaagaa
ttagtaagactagaaggagaggtccgttcgctcctaaaggatataagccagaaggttgct
gtttatagcacgtgcttgtaa
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