Lutra lutra (Eurasian river otter): 125081396
Help
Entry
125081396 CDS
T08100
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04613
Neutrophil extracellular trap formation
llv05034
Alcoholism
llv05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
125081396
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
125081396
09165 Substance dependence
05034 Alcoholism
125081396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125081396
Enzymes [BR:
llv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125081396
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
125081396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
125081396
NCBI-ProteinID:
XP_047551976
LinkDB
All DBs
Position
11:51263533..52202167
Genome browser
AA seq
1090 aa
AA seq
DB search
MMSSPVQPDGVAGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVD
PVVREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQ
QQELLEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKS
ATKDTPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDTKDDFPL
RKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGP
SSPNNGPAGNVPENDTSVLPPTPHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGLP
AVPTQLNASNSLKEKQKCETQTLRQGVPLPGQYAGSIPATSSHPHVALEGKPNSSHQALL
QHLLLKEQMRQQKLLVAGGVPLHPQSPLAAKERISPGIRGTHKLPRHRPLNRTQSAPLPQ
STLAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEELQGDQAMQ
EDRAPSSGNSTRSDSSACVDDTLGQVGAVKVKEEPVDSDEDAQIQEMESGEQAAFMQQPF
REPQHTRALSVHQAQLAVVGMDGLEKHRLFSRTHSSPAASILPHPAMDGPLQPGSATGIA
YDPLMLKHQCICGNSTTHPEHAGRIQSIWSRLQETGLLNKCERIQGRKASLEEIQLVHSE
HHSLLYGTNPLDGQKLDPRTLLGDASQKFFSSLPCGGLGVDSDTIWNELHSSGAARMAVG
CVIELASKVASGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQLNISKILI
VDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTG
GLDPPMGDVEYLEAFRTVVTPVAKEFDPDMVLVSAGFDALEGHAPPLGGYKVTAKCFGHL
TKQLMTLADGHVVLALEGGHDLTAICDASEACVNALLGNELEPLAEDILHQTPNMNAVVS
LQKIIEIQSKYWKSVRMVAVPRGCALAGTQLQEETETVSALASLTVDVEHPFASEDSRTA
GEPMEEEPAL
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctcgccagtgcagcctgatggggtggctggacgagagcagctcttggctcag
cagagaatgcacagtatgatcagctcagtggatgtgaagtcagaagttcccgtgggcctg
gagcccatctcacctttagacctgaggaccgacctcaggatgatgatgcctgtggtggat
cctgttgtccgtgagaagcaactgcagcaagagttactccttatccagcaacagcagcaa
atccagaagcagctcctgatcgccgagtttcagaaacaacatgagaacttgacacggcag
caccaggcgcagctccaggaacacatcaagttgcaacaggaacttctagccataaaacag
caacaagaactcctagaaaaggagcagaaactggagcagcagaggcaagaacaggaagta
gagaggcaccgcagagaacagcagcttcctcctctcagaggcaaagatagaggacgagaa
agggcagtggcaagtacagaagtaaagcagaagcttcaagaattcctattgagtaaatca
gcaacaaaagacactccaacaaatggaaaaaatcattccgtgagccgccatcccaagctc
tggtacacggctgcccaccacacgtcactggatcaaagctctccacccctgagtggaaca
tctccatcctacaaatacacattaccaggagcacaggacacgaaggatgatttccccctt
cgaaaaactgcctctgagcccaacttgaaggtgcggtccaggttaaaacagaaagtggca
gagaggagaagcagccccttactcaggcggaaggatggaaatgttgtcacttcattcaag
aagcgaatgtttgaggtgacagaatcttctgtcagtagcagctctccagggtctggtccc
agctcaccaaacaatgggccagctggaaacgttcctgaaaacgacacctcggttttgcca
cctactcctcatgctgagcaaatggtgtcccagcaacgcattctaattcatgaagattcc
atgaacctgctaagtctttatacctctccctctttgcccaacattaccttgggacttccg
gcagtgccaacgcagctcaacgcttcgaattcactcaaagaaaaacagaagtgtgagacc
cagacgctccgacaaggcgtccctctgcctggacagtacgctggcagcatcccagcgact
tcaagccatccccacgttgctttagagggaaagcccaatagcagccaccaagcactcctg
cagcatctcttattgaaagaacaaatgcgacagcagaagcttctcgtggctggtggagtt
cccttacatcctcagtctccgttggcagcaaaggagagaatttcccctggcattagaggt
acccacaaattaccccgtcacaggcccctgaatcgaacccagtctgcacctctgcctcag
agcacattggctcagctggtcattcagcagcaacaccagcagttcttggagaagcagaag
caataccagcagcagatccacatgaacaaactgctttcgaaatctattgaacaactgaag
caaccaggcagtcacctcgaggaagcggaggaagagcttcagggggaccaggcgatgcag
gaagacagagcgccctctagtggcaacagcactaggagcgacagcagtgcttgtgtggat
gacacactgggacaagttggggcggtgaaggtcaaggaggaaccagtggacagtgatgaa
gatgctcagatccaggaaatggaatctggggagcaggctgcttttatgcaacagcccttc
cgggagccccagcacacacgtgcgctctcagtgcaccaagctcagctggctgtggttggc
atggatggattagagaaacatcgtcttttctccaggacacattcctcccctgctgcctcc
attttacctcatccagcaatggacggccccctccagcctggctctgcaactggaattgcc
tatgaccctctgatgctgaaacaccagtgcatttgtggcaattccaccacccaccctgag
catgctggacgaatacagagcatctggtcacgactgcaagaaactgggctgctaaataaa
tgtgagcgaattcaaggtcgaaaagccagcctggaggaaatacagcttgttcattctgaa
catcactcactgttgtatggcaccaaccccctggatggacagaagctggaccccaggaca
ctcctaggtgatgcctctcaaaagtttttttcctcattaccttgtggtggacttggggtg
gacagtgacaccatttggaatgagctgcactcgtccggtgctgcacgcatggctgttggc
tgtgtcatcgagctggcttccaaagtggcctcaggagagctgaagaatgggtttgctgtt
gtaaggcccccaggccatcatgctgaagaatccacagccatggggttctgcttttttaat
tcagttgcaattaccgccaaatacttgagagaccaactaaatataagcaagatattgatt
gtagatctggatgttcaccatggaaatggtacccagcaggccttttatgctgaccccagc
atcctgtatatttcactccatcgctatgatgaagggaactttttccctggcagcggagcc
ccaaatgaggttggaacagggcttggggaaggatacaatataaatattgcctggacaggt
ggccttgatccccccatgggagatgtagagtaccttgaagcattcaggactgtagtgacg
cctgtggccaaagagtttgatccagacatggtcctagtttccgctggatttgatgcatta
gaaggccatgcccctcctctggggggttacaaagtgacagcaaaatgctttggtcatttg
acgaagcagttgatgacattggctgatggacacgtggtgttggctctagaaggaggacat
gatctcacagccatctgtgatgcctcagaagcctgtgtaaatgcccttctaggaaatgag
ctggagccgcttgccgaggatattctccaccaaaccccgaatatgaatgctgttgtttct
ttacagaagatcattgaaattcaaagcaagtactggaagtcagtaaggatggtggctgtg
ccaaggggttgtgctttggctgggactcagttgcaggaggagaccgagactgtttctgcc
ctggcctccctgacggtagatgtagaacacccctttgcttcagaagatagcagaactgct
ggtgagcctatggaagaggagccagccttgtga
DBGET
integrated database retrieval system
