Lutra lutra (Eurasian river otter): 125081427
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Entry
125081427 CDS
T08100
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125081427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125081427
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125081427
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
125081427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
125081427
NCBI-ProteinID:
XP_047552025
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All DBs
Position
1:complement(208260172..208294643)
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AA seq
365 aa
AA seq
DB search
MAPRHEAPRLPGLVQTRGGAQEKPIELQAVAAAAVAAGAAAAQVDDAGRVVGGGAVRAGA
TRADDVRRAERLGSMASVVLSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTS
GSARVKLGHTDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIA
NTLYRIFNNKSSVDLKSLCISPREHCWILYVDVLLLECDGNLFDTICIAVKAALFNTRIP
RVRVLEDEEGSKDIELSDDPYDCIRLSVENVPCIVTLCKIGYRHVVDATLQEEACSLASL
LVSVTSTGVVTCMRKVGKGSLDPESIFEMMETGKRVGKVLHASLQSVLHKEESLGPKRQK
VGFLG
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggctccccggcacgaggcgccgcggcttcctggactcgtccagacacggggcggcgcg
caggagaagcccatcgagctgcaggcggtggcggcagcggcggtggctgcaggagcggcc
gccgcgcaggttgatgacgcagggcgcgtggtgggggggggagctgtccgcgccggggcg
acgcgagcagatgacgtgcgacgagcggagcggctaggcagcatggcgtcggtggtgctg
agcgaggctgagaaggtgtatatcgtgcacggcgttcaggaggacctccgtgtggatggc
cgtggctgtgaggactaccgatgtgtcgaagtagaaaccgacgtggtgtctaacaccagt
gggtctgccagggtcaagctgggtcacacagacatcttggtgggagtgaaagcagaaatg
gggacaccgaagctagagaaaccaaatgaaggttacttggagttcttcgttgactgttca
gccaatgctacccctgaatttgaaggtcgaggaggtgatgaccttggcacagagattgct
aacaccctctaccggatatttaacaacaagagcagcgtcgacctgaagtccctctgcatc
agcccccgggagcactgctggatcctctacgtggacgtgctgctgctggaatgtgacggg
aatctgttcgacaccatctgcattgctgtgaaggctgctctcttcaacacaaggataccg
agagttcgtgttctagaggatgaagaggggtccaaggacattgaactctcagatgaccct
tatgactgcatccggctaagtgtggagaatgtcccctgcattgtcaccctgtgcaagatt
ggctatcggcatgtcgtggatgctactcttcaagaggaggcctgctccttggccagcttg
ctggtgtccgtgaccagcacgggagtcgtgacgtgcatgagaaaagtggggaagggcagc
ctggacccagagagcatcttcgagatgatggagaccggcaagcgagtgggcaaggtgctg
cacgcctccctgcagagcgtcctacacaaggaggagagcctggggcccaagagacagaaa
gtcggcttcctgggatga
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integrated database retrieval system