KEGG   Lutra lutra (Eurasian river otter): 125081427
Entry
125081427         CDS       T08100                                 
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    125081427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:llv03019]
    125081427
Messenger RNA biogenesis [BR:llv03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     125081427
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     125081427
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 125081427
NCBI-ProteinID: XP_047552025
LinkDB
Position
1:complement(208260172..208294643)
AA seq 365 aa
MAPRHEAPRLPGLVQTRGGAQEKPIELQAVAAAAVAAGAAAAQVDDAGRVVGGGAVRAGA
TRADDVRRAERLGSMASVVLSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTS
GSARVKLGHTDILVGVKAEMGTPKLEKPNEGYLEFFVDCSANATPEFEGRGGDDLGTEIA
NTLYRIFNNKSSVDLKSLCISPREHCWILYVDVLLLECDGNLFDTICIAVKAALFNTRIP
RVRVLEDEEGSKDIELSDDPYDCIRLSVENVPCIVTLCKIGYRHVVDATLQEEACSLASL
LVSVTSTGVVTCMRKVGKGSLDPESIFEMMETGKRVGKVLHASLQSVLHKEESLGPKRQK
VGFLG
NT seq 1098 nt   +upstreamnt  +downstreamnt
atggctccccggcacgaggcgccgcggcttcctggactcgtccagacacggggcggcgcg
caggagaagcccatcgagctgcaggcggtggcggcagcggcggtggctgcaggagcggcc
gccgcgcaggttgatgacgcagggcgcgtggtgggggggggagctgtccgcgccggggcg
acgcgagcagatgacgtgcgacgagcggagcggctaggcagcatggcgtcggtggtgctg
agcgaggctgagaaggtgtatatcgtgcacggcgttcaggaggacctccgtgtggatggc
cgtggctgtgaggactaccgatgtgtcgaagtagaaaccgacgtggtgtctaacaccagt
gggtctgccagggtcaagctgggtcacacagacatcttggtgggagtgaaagcagaaatg
gggacaccgaagctagagaaaccaaatgaaggttacttggagttcttcgttgactgttca
gccaatgctacccctgaatttgaaggtcgaggaggtgatgaccttggcacagagattgct
aacaccctctaccggatatttaacaacaagagcagcgtcgacctgaagtccctctgcatc
agcccccgggagcactgctggatcctctacgtggacgtgctgctgctggaatgtgacggg
aatctgttcgacaccatctgcattgctgtgaaggctgctctcttcaacacaaggataccg
agagttcgtgttctagaggatgaagaggggtccaaggacattgaactctcagatgaccct
tatgactgcatccggctaagtgtggagaatgtcccctgcattgtcaccctgtgcaagatt
ggctatcggcatgtcgtggatgctactcttcaagaggaggcctgctccttggccagcttg
ctggtgtccgtgaccagcacgggagtcgtgacgtgcatgagaaaagtggggaagggcagc
ctggacccagagagcatcttcgagatgatggagaccggcaagcgagtgggcaaggtgctg
cacgcctccctgcagagcgtcctacacaaggaggagagcctggggcccaagagacagaaa
gtcggcttcctgggatga

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