Lutra lutra (Eurasian river otter): 125081619
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Entry
125081619 CDS
T08100
Name
(RefSeq) general transcription factor IIH subunit 3 isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03022
Basal transcription factors
llv03420
Nucleotide excision repair
llv05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125081619
09124 Replication and repair
03420 Nucleotide excision repair
125081619
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
125081619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125081619
03400 DNA repair and recombination proteins [BR:
llv03400
]
125081619
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
125081619
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
125081619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
125081619
NCBI-ProteinID:
XP_047552160
LinkDB
All DBs
Position
12:complement(83439271..83465097)
Genome browser
AA seq
309 aa
AA seq
DB search
MVSDEDELNLLVIVVDTNPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVI
ASHIQESRFLYPGKHGRLGDFFGDPGNPSSEFSPSGSKDGKYELFTAANEVIAEEIKDLM
TKSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMN
VIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRS
QLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKA
KKKKLKVSV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcagacgaagatgaattgaatcttctagttatcgtagttgataccaacccaatt
tggtggggaaagcaagcattaaaggaatctcagtttactttatcaaaatgcatagatgct
gtgatggtgctgggaaattctcatttattcatgaatcgttccaacaaacttgctgtgata
gcgagtcacattcaagaaagtcggttcttgtatcctggaaagcatggcagacttggagac
ttttttggagaccctggcaacccttcttctgagttcagcccgtcagggagcaaggacggg
aagtatgagttgttcacagcagcgaatgaagttattgctgaagagattaaggatctcatg
accaagagtgacataaagggtcaacatacagaaactctgctggcaggatccctcgccaaa
gctctttgctacattcatagaatgaacaaggaggtgaaagataatcaggaaatgaaatca
aggattttggtgattaaggctgcagaagacagcgccctgcagtatatgaacttcatgaat
gtcatcttcgcagcacagaagcagaatattttgatcgatgcctgtgttttagactcggat
tcaggactcctccaacaggcttgtgacatcacggggggactgtacctgaaggtacctcag
atgccttcccttctgcagtatctgctgtgggtttttctccctgatcaagatcaaagatct
cagttaatcctccctcccccagtccatgtggactaccgggcagcttgcttctgtcatcga
aatctcattgaaattggctatgtctgttctgtgtgcttgtcaatattctgcaatttcagt
cctatctgcaccacctgcgagacagcctttaagatttctctgcctcctgtgctgaaagcc
aagaaaaagaaactgaaagtgtctgtgtga
DBGET
integrated database retrieval system
