KEGG   Lutra lutra (Eurasian river otter): 125081676
Entry
125081676         CDS       T08100                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 4B
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03250  Viral life cycle - HIV-1
llv03272  Virion - Hepatitis viruses
llv04144  Endocytosis
llv04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125081676
   03272 Virion - Hepatitis viruses
    125081676
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    125081676
  09143 Cell growth and death
   04217 Necroptosis
    125081676
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:llv04131]
    125081676
   03400 DNA repair and recombination proteins [BR:llv03400]
    125081676
Membrane trafficking [BR:llv04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    125081676
DNA repair and recombination proteins [BR:llv03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    125081676
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_16 TIP49 AAA_14 RuvB_N AAA_5 AAA_22 IstB_IS21 AAA_25 AAA_18 DUF815 AAA_2 nSTAND3 RNA_helicase NPHP3_N AAA_24 AAA_33 AAA_17 PhoH AAA_7 AAA_28 Mg_chelatase ResIII NACHT Parvo_NS1 KAP_NTPase TPR_1 bpMoxR ABC_tran MCM Mre11_C_bact
Other DBs
NCBI-GeneID: 125081676
NCBI-ProteinID: XP_047552288
LinkDB
Position
12:13378969..13413878
AA seq 444 aa
MTSTSPNLQKAIDLAGKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRA
KCTEYLDRAEKLKEYLKKKEKNPQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQL
QGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGK
SYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLC
GSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPL
PEAHARAAMFKLHLGTTQNSLTETDFRELGKKTDGYSGADISIIVRDALMQPVRKVQSAT
HFKKVRGPSRADPNKTVDDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVCMSDMLRSLSN
TKPTVNEHDLLKLKKFTEDFGQEG
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgacatccacctcgcccaacctccagaaagcaatagatcttgctggcaaagcagcccag
gaagacaaagccgggaactatgaggaagcgcttcaactctaccaacatgccgttcagtat
tttcttcatgtagttaaatatgaagctcagggtgataaagccaagcaaagtatcagggca
aagtgtacagaatatcttgatagagcagaaaaactaaaggagtacctgaaaaagaaagag
aaaaatccacagaaaccagtgaaagagggacagccgagtccagctgacgagaaggggaat
gacagtgatggggaaggagaatctgatgatcctgaaaaaaagaaactacagaatcaactt
caaggtgccattgttatagagcgaccaaatgtgaaatggagtgatgttgctggtctcgaa
ggagccaaagaggcacttaaagaggctgtgatattgcctattaaattccctcatcttttt
acaggcaagagaacaccttggaggggaattctgttatttgggccacctggaacaggaaag
tcctatttagccaaagctgtagcaacagaagcaaacaactcaacatttttttcaatatct
tcctctgaccttgtctctaagtggctaggtgaaagtgaaaagctagttaagaacttattc
caacttgctagagagaacaaaccttccattatcttcattgatgaaattgattccctgtgc
ggctcaagaagtgaaaatgaaagcgaagccgcccggagaattaagacggagttcctagtt
caaatgcaaggtgttggtgtagacaatgatggaattttggttctgggagctacaaatata
ccgtgggttctggattctgccattagaagaagatttgagaaacgaatttatattcctttg
cctgaggcccacgcccgagcagcgatgtttaaactgcacctggggaccactcagaacagt
ctcacagaaacagacttccgggaactcgggaagaaaacggatggttattcgggggcggac
ataagtatcatcgtgcgcgatgcacttatgcagcctgttcgaaaagtgcagtcagctact
cattttaaaaaggtgcgcggaccttcacgagctgatcccaacaagacagtagatgatctg
ctaacaccctgttctcctggtgaccctggtgccattgaaatgacatggatggatgtccct
ggggataaacttttggagccagttgtttgcatgtcggatatgttacggtcactatctaac
acaaaacccacagtcaatgaacatgacttgttgaagttaaagaagtttacagaagatttt
ggccaagaaggctaa

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