Lutra lutra (Eurasian river otter): 125081871
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Entry
125081871 CDS
T08100
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2 isoform X1
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125081871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llv03041
]
125081871
03110 Chaperones and folding catalysts [BR:
llv03110
]
125081871
04121 Ubiquitin system [BR:
llv04121
]
125081871
Enzymes [BR:
llv01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
125081871
Spliceosome [BR:
llv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125081871
Complex C
U4/U6.U5 tri-SnRNP related factors
125081871
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
125081871
Chaperones and folding catalysts [BR:
llv03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
125081871
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
U-box type E3
125081871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
SUB1_ProdP9
Motif
Other DBs
NCBI-GeneID:
125081871
NCBI-ProteinID:
XP_047552697
LinkDB
All DBs
Position
12:65346352..65376484
Genome browser
AA seq
522 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYTHFYGGKKPDIPQANFRRLPFDHCSLSLQPFAYPVCTPEGVV
FDLLNIVPWLKKYGTNPSNGEKLDGRSLIRLNFAKNKEGKYHCPVLFTVFTNNTHIVAVR
TTGNVYTYEAVEQLNIKAKNFRDLLTDEPFSRQDIITLQDPTNLDKFNVSDFFHVKNNMK
MTDPDEEKAKQDPSYYLKNTNAETRETLQELYKEFKGDEVLAATMKVPEKKKVDKLNAAH
YSTGKVSASFTSTAMVPETTHEAAAIDEDVLRYQFVKKKGYVRLHTNKGDLNLELHCDMT
PKTCENFIKLCKKQYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNLSH
TGRGILSMANSGPNANKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAMENVESDPKTD
RPKEEIRIDSTTVFVDPYEEADAQIAEERKKTQLEEVAPESAIKTQQPKAGSQGPQTYRQ
GVGKYINPAATKRAAEEEPSTSTAVPAAKKKPSRGFGDFSSW
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgacagcatcagaaggacaagatgtacattacctgtgctgaatacactcat
ttctatggtggcaagaaaccagatatcccacaagccaattttcgtcgtttaccttttgat
cactgcagtctctctctgcagcccttcgcctacccggtctgcacccctgagggtgtcgtc
ttcgacttgcttaacatcgtcccttggcttaagaagtatgggaccaaccccagcaacgga
gagaaactggacgggaggtccctgatcaggctgaactttgcaaagaacaaggaaggaaag
taccactgcccagtgctgtttactgtgttcaccaacaacacccacattgtagctgtcagg
accaccggcaatgtctatacctacgaggcagtggaacagttaaatatcaaggccaagaac
ttccgagacctgctgacggacgagcccttctctcggcaggacatcatcacccttcaggac
cccaccaatttggacaaattcaacgtctccgatttctttcatgtgaagaataacatgaag
atgacagatcctgatgaagaaaaggccaaacaggacccatcttattatttgaaaaatacg
aatgccgagacccgtgagacgctgcaggagctctacaaggagttcaaaggggacgaggtc
ctggcagccaccatgaaggtccctgagaagaagaaagtggacaagctgaacgccgcgcac
tattccaccgggaaggtcagcgcctcctttacctccactgccatggttccggagaccaca
cacgaagcagccgccattgatgaggatgtgctgcgctaccagtttgtgaagaagaagggc
tacgtgcgcctgcacaccaacaagggcgacctcaatctggagctgcactgcgacatgacg
ccgaagacctgtgaaaacttcatcaagctctgcaagaagcagtactacgatggcaccatc
ttccacaggtccatccggaactttgtgatccaggggggtgaccccaccggcacaggcaca
ggtggggagtcgtactggggaaagcccttcaaagacgagttccggcccaacctctcgcac
acgggccggggcatcctcagcatggccaactcagggcccaacgccaacaagtctcagttc
tttatcacctttcgatcctgtgcgtacctggacaagaagcacaccatcttcgggcgagtt
gttgggggctttgacacgctgacagccatggagaacgtggagagtgaccccaaaaccgac
cgccctaaggaggagatccgcatcgactccaccaccgtgtttgtggatccctacgaggag
gccgatgctcagattgctgaggaacggaagaagacgcagctcgaggaggtggccccagaa
agcgctataaaaactcaacagcccaaggcggggagccaaggcccccagacgtaccgccag
ggggtgggcaagtacatcaacccagcagccacgaaacgggcagcagaggaagagccctca
accagcacagctgtccctgcagccaagaaaaagcccagccgaggctttggggacttcagc
tcctggtag
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