KEGG   Lutra lutra (Eurasian river otter): 125082026
Entry
125082026         CDS       T08100                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:llv00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125082026
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:llv01009]
    125082026
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:llv03021]
    125082026
Protein phosphatases and associated proteins [BR:llv01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125082026
Transcription machinery [BR:llv03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     125082026
    Little elongation complex (LEC)
     125082026
SSDB
Motif
Pfam: ELL Occludin_ELL DUF3450 DUF6185 RNA12 RNase_Y_N SPATS2-like SIKE EzrA
Other DBs
NCBI-GeneID: 125082026
NCBI-ProteinID: XP_047553077
LinkDB
Position
1:209389303..209464722
AA seq 613 aa
MAALKEARSYGLSCGRVSDGSKVSVFHVKLTDSALRAFESYRASQESVSLRPSIRFHGSQ
GHISIPQPDCPTEARTFSFYLSNIGRDSPQGSFDCIQQYVSSRGDVHLDCLGSIQDKITV
CATDDSYQKARQSMAQAEEETRSRGAIVIKAGGRYLGKKVQFRKPAPGATDAVPSRKRAT
PINLASAIKKSNVGGISGGSGVSQRPFRDRVLHLLALRPYRKAELLLRLQKDGLAQADKD
ALDGLLQQVANVNAKDGTCTLKDCVYKDVQKDWPGYSEGDQQLLKRMLVRKLCQPQSAVV
LPGDPAAASPPREHGNSASPPQKRSQPPDFTDPLVSKKTRISHFTQRAQPAINGKLSAPH
GREALLPTPGPLAGSDAHLPPRLEPPRAHDPLADVSNDLGHSGRDCEHGEVATPAPTTCL
SLPLLTDCAQPSRPHGGSSRSKSKKKSKKHKDKERAAEDRHRARLPDHMPSPLGAPPDAP
GLNGTCSSSSVPTSTSETPDYLLKYATISSSEQRQSYKNDFNAEYSEYRDLHARIEQITR
RFTQLDAQLRQLSQGSEEYETTRGQILQEYRKIKKTNTNYSQEKHRCEYLHSKLAHIKRL
IAEYDQRQLQAWP
NT seq 1842 nt   +upstreamnt  +downstreamnt
atggcggcgctaaaggaggctcggagctacgggctgtcgtgcgggcgggtcagcgacggc
agcaaagtgtccgtgttccacgtgaagctcaccgacagtgccctgagggccttcgagagc
taccgcgccagccaggagtctgtttcactgagaccatcaatccgatttcacggaagtcaa
gggcacatctccatcccccagcctgactgccccacagaggcacggacgttctccttctac
ctctccaacattggccgtgacagcccccagggcagcttcgactgcatccagcaatatgtc
tccagccgcggggatgttcacctggactgcctgggcagcatccaggacaaaatcacagtg
tgtgccaccgacgactcctaccagaaagcacggcagagcatggcacaggccgaagaggag
acacggagccgtggggccattgtcatcaaggctggaggccgctacctgggcaagaaggtt
cagtttcggaaaccagccccgggggccacggacgctgtcccttctcggaagcgggcgacc
cccatcaacctggccagtgccatcaagaagagcaatgttggtggcattagcgggggcagt
ggggtgtctcagaggcctttccgcgaccgggtgctgcacctcctggcgctgaggccctac
cggaaggccgagctgttgctgcggctgcagaaggacggcctggcccaggcggacaaggat
gcgctggatggcctcctccagcaggtggccaacgtgaatgccaaggatggtacgtgcacg
ttgaaggactgtgtatataaggacgtgcagaaggactggcctggctactcggaaggggac
cagcagctgttgaagcggatgcttgtccggaagctgtgtcagccgcagagtgccgttgtc
ctgcccggagaccccgctgccgccagtcctccccgggaacatggaaactcagcctcaccc
cctcagaaacgatcacagcctcctgatttcaccgaccccctggtcagcaagaaaaccagg
atatcacattttacccagagagctcagcctgccatcaatgggaagctgagtgcaccccac
ggccgtgaggccctgctgcccactccaggcccactagctggctcagacgcccacctgccc
ccacggttggagcccccgagggcccatgaccctctagctgacgtcagcaatgacctgggt
cacagtggccgggactgtgagcacggggaagtggccacgccggccccgactacgtgcctc
agcttgcccctgctgacggactgtgcccagcccagcaggccccatggtggctcatcacgc
agcaaatccaagaagaagtccaagaagcacaaagacaaggagagagcagctgaggataga
caccgggcccggttgccagaccacatgcccagccccctaggagccccaccagatgcccca
ggtttgaacgggacctgcagcagctcaagtgtccccacatcgacctcagagacgcccgac
tacttgctaaaatacgctaccatttcctcctcggagcagcgccagagctacaagaacgac
ttcaacgcggaatacagcgagtaccgcgacctgcacgcacgcatcgagcagatcacgagg
cgcttcacgcagctggacgcccagctccggcagctgtcccagggctctgaggagtatgag
actactcggggccagattttgcaggaatatcgaaaaatcaaaaagaccaacaccaactac
agccaggaaaagcaccgctgcgagtacctgcacagcaagctggcccacatcaagaggctc
attgccgagtacgaccagcggcagctgcaggcctggccctag

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