Lutra lutra (Eurasian river otter): 125082105
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Entry
125082105 CDS
T08100
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03320
PPAR signaling pathway
llv04120
Ubiquitin mediated proteolysis
llv04137
Mitophagy - animal
llv04140
Autophagy - animal
llv05012
Parkinson disease
llv05022
Pathways of neurodegeneration - multiple diseases
llv05167
Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125082105
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125082105
04137 Mitophagy - animal
125082105
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125082105
09160 Human Diseases
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
125082105
09164 Neurodegenerative disease
05012 Parkinson disease
125082105
05022 Pathways of neurodegeneration - multiple diseases
125082105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125082105
Ubiquitin system [BR:
llv04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
125082105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
125082105
NCBI-ProteinID:
XP_047553270
LinkDB
All DBs
Position
12:82501542..82505349
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AA seq
918 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGGLSSPF
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctgacgggtaagaccatcaccctggaggtggagcccagt
gacaccatcgagaacgtcaaggcgaagatccaggacaaggagggcatcccccctgaccag
cagaggttgatctttgcggggaaacagctggaagatgggcgcaccctgtccgactacaac
atccagaaggagtccactctgcacctggtcctccgcctcagagggggcatgcagatcttc
gtgaagaccctgacgggtaagaccatcaccctggaggtggagcccagtgacaccatcgag
aacgtcaaggcgaagatccaggacaaggagggcatcccccccgaccagcagaggttgatc
tttgctgggaaacagctggaagatgggcgcaccctgtccgactacaatatccagaaggag
tccactctgcacctggtcctccgcctcagagggggcatgcagatcttcgtgaagaccctg
acgggtaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggcg
aagatccaggacaaggagggcatcccccccgaccagcagaggttgatctttgcggggaaa
cagctggaagatgggcgcaccctgtccgactacaacatccagaaggagtccactctgcac
ctggtcctccgcctcagagggggcatgcagatcttcgtgaagaccctgacgggtaagacc
atcaccctggaggtggagcccagtgacaccatcgagaacgttaaggcgaagatccaggac
aaggagggcatcccccccgaccagcagaggttgatctttgctgggaaacagctggaagat
gggcgcaccctgtccgactacaacatccagaaggagtccactctgcacctggtcctccgc
ctcagagggggcatgcagatcttcgtgaagaccctgacgggtaagaccatcaccctggag
gtggagcccagtgacaccatcgagaacgtcaaggcgaagatccaggacaaggagggcatc
ccccccgaccagcagaggttgatctttgctgggaaacagctggaagatgggcgcaccctg
tccgactacaacatccagaaggagtccactctgcacctggtcctccgcctcagagggggc
atgcagatcttcgtgaagaccctgacgggtaagaccatcaccctggaggtggagcccagt
gacaccatcgagaacgtcaaggcgaagatccaggacaaggagggcatcccccccgaccag
cagaggttgatctttgctgggaaacagctggaagatgggcgcaccctgtccgactacaac
atccagaaggagtccactctgcacctggtcctccgcctcagagggggcatgcagatcttc
gtgaagaccctgacgggtaagaccatcaccctggaggtggagcccagtgacaccatcgag
aacgttaaggcgaagatccaggacaaggagggcatcccccccgaccagcagaggttgatc
tttgctgggaaacagctggaagatgggcgcaccctgtccgactacaacatccagaaggag
tccactctgcatctggtcctccgcctcagagggggcatgcagatcttcgtgaagaccctg
acgggtaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgttaaggcg
aagatccaggacaaggagggcatcccccccgaccagcagaggttgatctttgcggggaaa
cagctggaagatgggcgcaccctgtccgactacaacatccagaaggagtccactctgcac
ctggtcctccgcctcagagggggcatgcagatcttcgtgaagaccctgacgggtaagacc
atcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggcgaagatccaggac
aaggagggcatcccccccgaccagcagaggttgatctttgcggggaaacagctggaagat
gggcgcaccctgtccgactacaacatccagaaggagtccactctgcacctggtcctccgc
ctcagagggggcatgcagatcttcgtgaagaccctgacgggtaagaccatcaccctggag
gtggagcccagtgacaccatcgagaacgtcaaggcgaagatccaggacaaggagggcatc
ccccccgaccagcagaggttgatctttgctgggaaacagctggaagatgggcgcaccctg
tccgactacaacatccagaaggagtccactctgcacctggtcctccgcctcagagggggc
atgcagatcttcgtgaagaccctgacgggtaagaccatcaccctggaggtggagcccagt
gacaccatcgagaacgtcaaggcgaagatccaggacaaggagggcatcccccccgaccag
cagaggttgatctttgcggggaaacagctggaagatgggcgcaccctgtccgactacaac
atccagaaggagtccactctgcacctggtcctccgcctcagagggggcatgcagatcttc
gtgaagaccctgacgggtaagaccatcaccctggaggtggagcccagtgacaccatcgag
aatgtgaaagggaagattcaagagaaagagggcatcccccctgaccagcagaggttgatc
tttgctgggaaacagctggaggatgggcgcaccctgtccgactacaacatccagaaggag
tccactctgcacctggtcctgcgattgaggggtggtggcttaagttcccccttttaa
DBGET
integrated database retrieval system