Lutra lutra (Eurasian river otter): 125082155
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Entry
125082155 CDS
T08100
Name
(RefSeq) desmoglein-3 isoform X1
KO
K07598
desmoglein 3
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04382
Cornified envelope formation
llv04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
125082155
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125082155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
llv04515
]
125082155
Cell adhesion molecules [BR:
llv04515
]
Cadherins
Major cadherins
125082155
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Ig_CLSTN
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
125082155
NCBI-ProteinID:
XP_047553405
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Position
12:complement(41246866..41280461)
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AA seq
987 aa
AA seq
DB search
MTWLLFRTPGALAILMVLILVHGELRIETKGQHGEDDTAVQGKRRYKREWVKFAKPCRER
EDNSKRNPIAKITSDFQATQKITYRISGMGIDQPPFGIFVVDKNTGEINITAIVDREETP
SFLITCHALNALGQDVEKPLILTVKILDVNDNPPVFSQSIFVGEIEENSASNSLVMILNA
TDADEPNHLNSKIAFKIVSQEPAGIPMFLLSRHTGEVRTLTNSLDREQVSSYRLVVSGAD
KDGEGLSTQCECSIKVKDVNDNFPVFQDSQYSALIEENTLSSELLRFRVTDWDEEFTDNW
LAVYFFTSGNEGNWFEIQTDPRTNEGILKVVKALDYEQLQNVQLGIAVKNKAEFHQSIIS
QYRVQSTPVTIQIVNIKEGITFRPASKTFTVQKGISSKKLVNYVLGMYQAIDEDTNKTAS
YVKYIMGRNDGGLLFIDSKTAQIKFVKNIDRDSTFIVNRTITAEVLAIDENTGKTSTGTI
YVEVPGFNENCPTIILEKKTICSSQSSVVVSARALDNKYSGPYTFSLEEQPLKLPVVWSI
TTLNATSALLNAQQPLSPGSHSISLTVTDSQDRQCETPESLTLEVCQCDNRDTCRNSEKN
KDPVYIAGKRTSGRLGPAAIGLLLLGLLLLLLAPLLLLTCDCGMGPIRGVTGGFIPVPDG
SEGTIHPWGIEGAHPEDKEITNIRVPPITANGADFMENSEVCTNTYAGGTVVEGTSGMEL
TTKLGAATGSGAAGGFGGATGLGIGSAGQSGTMRTRHSTGGTNKDYGEGAVSMNFLDSYF
SQKAFACAEEDDAQEANDCLLIYDNEGMGAPGSPVGSLGCCSFIADELDDSFLDSLGPKF
KKLAEISLGIDEEAQRFQPPSKDSHLGMEPCGCSLGVQQPESVRGQTLSGSQGTSALSAS
GSVLQPAVSIPDPLQHGSYLVTETYSASGSLVQPSTTVSEPLLTQNVIVTERVIGPISNV
PGNLQTPMEIRGSCNMICIEDPCSRLI
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgacttggctccttttcagaacaccaggggctctggccattttaatggtgctcatattg
gttcatggagaattgcgaatagagacaaagggtcaacacggagaagatgatactgctgta
caaggcaaaaggagatacaaacgtgaatgggtgaaatttgcaaaaccctgccgagaaaga
gaagacaactcaaaaaggaatccaattgccaaaattacttcagatttccaagcaacccag
aaaattacctaccgaatttctggaatgggaattgatcaacccccttttggaatctttgtt
gttgacaaaaacactggagaaattaacataacagccatagttgatcgtgaggaaactcca
agcttcctgatcacgtgccatgctctaaatgccctaggacaagatgtagagaaaccactt
atactaacggttaaaattttagatgtcaatgacaatcctccagtattttcacaaagtata
tttgtgggagaaattgaagaaaatagtgcttcaaactcactggtgatgatactaaacgcc
acggacgcagatgaaccaaaccacttgaactctaaaatagccttcaaaattgtctctcag
gaacctgcaggcatacccatgttcctcctaagcagacacactggggaagtccgtacttta
accaattctcttgatcgagagcaagttagcagctatcggctggttgtgagtggtgccgac
aaagatggagaagggctatcaactcaatgtgaatgtagtatcaaagtgaaagatgttaat
gataatttcccagtgttccaagactctcagtattcagcacttattgaggaaaatacttta
agttctgagttgcttcgatttcgagttactgattgggacgaagaattcacagataattgg
cttgcagtgtatttcttcacctctggaaatgaagggaattggtttgagatacaaactgat
ccgagaacgaatgaaggcatcctgaaggtggttaaggctctagattatgaacaactacaa
aatgtacaacttggtattgctgtcaaaaacaaagctgaatttcaccaatcaataatttct
cagtatcgagtgcagtcaaccccagtcacgatccaaatagtcaacattaaagaaggaatt
acattccgtcctgcttccaagacatttactgtgcagaaaggcataagtagtaaaaaactg
gtcaattatgttctgggaatgtatcaagccattgatgaggatactaacaaaactgcctca
tatgtcaagtatatcatgggacgtaatgatggtggtttactattcattgattcaaaaact
gctcagatcaaatttgtcaaaaacatcgatcgggattctactttcatagttaacaggaca
atcacagctgaggttctggccatagacgaaaacacaggtaaaacatctacaggcaccata
tatgttgaggtacctggttttaatgaaaattgtccaacaatcatccttgaaaagaaaaca
atttgtagttcacaatcttctgtggttgtctcagctagagcactagacaataagtattct
ggtccctacacgttttctctggaggagcaaccactaaaattgccagttgtctggagtatc
acaacactcaatgctacttccgcactcctaaatgcccagcagccactgtctcctggatcg
cacagtatctccctcacagttaccgacagtcaggacagacagtgcgagacaccagagagc
ctgactctggaagtctgccagtgtgacaacagggacacctgcagaaattcggagaagaat
aaagaccctgtatacatagctggaaagagaacatcagggaggttggggcctgctgccatc
ggcctgctactccttggtcttttgctgttgctattggccccccttctgctgctgacctgt
gactgtgggatgggtcctatccggggagtgacaggaggatttattccggttcctgatggt
tcagaaggaacaattcatccgtggggaattgaaggagcccatcctgaagacaaggaaatc
acaaatattcgtgtgccacctatcactgccaatggagctgatttcatggaaaattctgaa
gtttgtacgaatacatacgctggagggacagtggtggaaggaacctcgggaatggaactg
accaccaaacttggagcagctacaggatctggagccgctggagggtttggaggagccact
ggacttggcattggttctgcaggacagtctggaacaatgagaacaaggcattctacggga
ggaaccaataaagactatggtgaaggagcagtaagcatgaatttcctggactcctacttt
tctcagaaagcatttgcctgtgcagaggaagacgatgcccaggaagcaaatgactgcttg
ctgatctatgataatgaaggaatgggtgcccccggttctcccgtgggctccttgggttgt
tgcagttttattgccgatgagctggatgacagcttcttggactcgctcggccccaaattt
aaaaagcttgcagagataagcctcgggatcgatgaggaagcccaacgatttcagccacct
tccaaagacagccatttgggcatggaaccctgtggctgttccctaggagtccaacagcca
gaatctgttaggggccagactttgtcaggcagtcaaggaacttctgctttgtctgcttcc
ggctctgttctgcagccagctgtttccattcctgaccctctgcagcatggtagctatttg
gtaacagagacttactcggcctctggttctctcgtgcaaccttccactacagtctctgag
ccacttctcacgcaaaatgtaatagtgacagaaagggtgattggtcctatttccaatgtt
cctggcaacctacagactccgatggagataagggggtcatgtaatatgatctgtatagaa
gatccttgttcccgtctgatatga
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