Lutra lutra (Eurasian river otter): 125082336
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Entry
125082336 CDS
T08100
Name
(RefSeq) AFG3-like protein 2 isoform X1
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
125082336
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
llv01002
]
125082336
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
llv03110
]
125082336
Peptidases and inhibitors [BR:
llv01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
125082336
Chaperones and folding catalysts [BR:
llv03110
]
Other chaperones and cochaperones
AAA proteases
125082336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_22
RuvB_N
AAA_5
AAA_16
TIP49
nSTAND3
AAA_14
gpW
AAA_17
AAA_2
AAA_28
ThcOx
AAA_33
IstB_IS21
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
125082336
NCBI-ProteinID:
XP_047553785
LinkDB
All DBs
Position
12:complement(61711895..61755199)
Genome browser
AA seq
806 aa
AA seq
DB search
MAHRCLRLWGRGGCWPRGLPPLFVPGGRLDPTERSCLRTLYRYATTQATTSRNSLLTDVI
ATYQRFCSRPPKGFEKYFPNGKNGKKPSESKEVTGEKKESKPAATSRPSGGGVGGGGKRG
GKKDDSHWWSRFQKGDFPWDDKEFRMYFLWTALFWGGVMFYFLFRSSGREITWKDFVNNY
LSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGEN
RVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAKVL
KDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAK
ATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRG
NFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPD
IKGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDS
INQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPR
GKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVAEEIFFGRITTGAQDDLRKVTQSAYA
QIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINEAYKRTVALLTEK
KADVEKVALLLLEKEVLDKNDMVELLGPRPFAEKSTYEEFVEGTGSLDEDTSLPEGLKDW
NKEREKEKEEPRDEKVANQIQEGRPF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaccgctgcctgcggctctggggccggggaggctgctggccccgcggcctgccc
ccactgttcgtgcctggcggccgcctggaccccaccgagcggtcctgcctccggacgctt
tatcgatatgctacaactcaagcaacaaccagcagaaattctcttttgacagatgtaatt
gctacttatcaaagattctgttctcgacctccaaaagggtttgagaaatactttcctaat
ggaaaaaatgggaaaaaacctagtgaatctaaagaagttacaggagaaaaaaaagaatca
aagccagctgctacctcacgcccttctggaggaggagttggtggcggtggaaaacgaggt
ggcaagaaagacgattctcactggtggtccagattccagaagggtgactttccatgggat
gacaaggaattcaggatgtactttctctggactgctctattttggggtggagtcatgttt
tacttcctgttcaggagctccgggagagaaatcacgtggaaggactttgtcaataactat
ctttccaaaggagtagtagacagactggaagtcgtcaacaagcgttttgttcgagtgact
tttactccaggaaaaactcccgttgatgggcaatacgtctggtttaatattggcagtgtg
gacacctttgagcggaatctggaaaccttacagcaggaattgggcatagaaggggagaat
cgggttcctgtagtgtacattgccgaaagtgatggctcgtttctcctgagcatgttgcct
acagtgctcatcatcgctttcttactctacaccatccgaagagggcctgccgggattggc
cggacaggccgggggatgggtggactcttcagtgttggagaaaccactgccaaagtcttg
aaggatgaaatagatgtgaagttcaaagatgtggctggctgcgaggaggccaagctagag
ataatggaatttgtgaatttcttgaaaaacccaaagcaatatcaagatctaggagcaaaa
atcccaaagggtgccattctcaccggtcctccaggcactgggaagacactgctagctaag
gccacagctggagaagccaacgtccccttcatcaccgttagtggatctgagtttttggag
atgtttgttggtgtgggtccagctagagtccgagacttatttgcccttgctcgcaagaat
gccccctgcattctcttcattgatgaaatagatgccgtgggaaggaaaagaggaagaggc
aactttggggggcagagtgagcaggagaacacactcaatcagctgctcgtggagatggac
ggttttaacacaacaacaaatgtcgtcattttggcaggcaccaatcgaccagatattcta
gacccagcactgttgcggccagggcgctttgataggcaaatctttattggaccacctgac
ataaaaggaagagcctctattttcaaagttcacctcagaccactaaaactggacagcgcc
ctggaaaaggaaaaattggccagaaaacttgcatccttgactccagggttttcgggagct
gatgttgctaatgtctgtaacgaagcggctctgatagctgcgagacacctctcagattcc
ataaatcagaaacactttgaacaagcaattgagcgagtgattggcggcttagagaaaaaa
acccaggttctgcagcccgaggagaagaagaccgtggcgtaccatgaggcaggtcatgcg
gttgccgggtggtacctggaacatgcagacccacttctaaaggtctccatcatccctcgg
ggcaaaggactgggttatgctcagtacttacccaaagagcagtacctgtacaccaaggag
cagctcttggaccggatgtgcatgaccctggggggccgggtggcggaagaaatcttcttc
gggagaattacaaccggtgctcaagatgacttgagaaaagtaacccagagtgcctatgct
caaattgttcagtttggcatgaacgagaaggttgggcagatctcctttgatctcccacgt
cagggcgatatggttttagagaagccttacagcgaagccaccgcgagactgatagatgac
gaagtacgaatacttattaatgaagcttataagagaacagtggctctcctcacagagaag
aaagctgatgtggagaaggttgctcttctattattagaaaaagaagtgttagataagaat
gatatggttgaacttttgggccccagaccgtttgcagaaaaatctacctatgaagaattt
gtagaaggcactggcagcttggatgaggacacttcgcttccagagggccttaaagactgg
aacaaagaacgggaaaaggagaaagaggagccccgggatgagaaagtcgccaaccagatc
caagaagggagaccattttag
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