Lutra lutra (Eurasian river otter): 125082438
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Entry
125082438 CDS
T08100
Name
(RefSeq) laminin subunit alpha-1-like isoform X1
KO
K05637
laminin, alpha 1/2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04151
PI3K-Akt signaling pathway
llv04510
Focal adhesion
llv04512
ECM-receptor interaction
llv04820
Cytoskeleton in muscle cells
llv05145
Toxoplasmosis
llv05146
Amoebiasis
llv05165
Human papillomavirus infection
llv05200
Pathways in cancer
llv05222
Small cell lung cancer
llv05410
Hypertrophic cardiomyopathy
llv05412
Arrhythmogenic right ventricular cardiomyopathy
llv05414
Dilated cardiomyopathy
llv05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125082438
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125082438
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125082438
09142 Cell motility
04820 Cytoskeleton in muscle cells
125082438
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125082438
09162 Cancer: specific types
05222 Small cell lung cancer
125082438
09172 Infectious disease: viral
05165 Human papillomavirus infection
125082438
09174 Infectious disease: parasitic
05146 Amoebiasis
125082438
05145 Toxoplasmosis
125082438
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
125082438
05412 Arrhythmogenic right ventricular cardiomyopathy
125082438
05414 Dilated cardiomyopathy
125082438
05416 Viral myocarditis
125082438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Laminin_EGF
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
3keto-disac_hyd
JAG1-like_EGF2
Hepar_II_III
DUF948
Motif
Other DBs
NCBI-GeneID:
125082438
NCBI-ProteinID:
XP_047554059
LinkDB
All DBs
Position
12:complement(57158478..57322006)
Genome browser
AA seq
3086 aa
AA seq
DB search
MRGGGRAGVALLASLLWVAARCQQRGLFPAILNLASNAHISTNATCGEQGPEMSCKLVEH
VPGRPVRNAQCQICDANSANPKERHPISNAIDGTNNWWQSPSIQNGREYHWVTITLDLRQ
VFQVAYVIIKAANAPRPGNWILERSLDGTTFSPWQYYAVSDTECLTRYNITPRRGPPTYR
ADDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDLSPKLLEFTSARYIRLRLQRIRTLN
ADLMTLSHRDPKDLDPIVTRRYYYSIKDISVGGMCICYGHASSCPWDETTKRLQCQCEHN
TCGESCSRCCPGYHQQPWRPGTVSAGNTCEKCNCHNKAQDCYYDESVASQRRSLNTAGQF
QGGGVCINCLQNTMGINCETCIDGYYRPYKVSPYEDNPCRPCDCDPFGSLSSVCIKDELQ
SDLHKGKRPGQCPCKEGYAGEKCDRCQFGYKAYPACIRCECSRAGSVNEDPCSEPCLCKE
NVEGDNCDLCKPGFYNLKERNPEGCSECFCFGVSDVCDSLSWSISQVRDMSGWLVTDLVS
PSKIPSQQDALGGHHWISINNTVVSQRLTSKYYWSAPEAYLGNKLTAFGGFLKYTVSYDI
PVETVDGDLMSHADVIIKGNGLTLSTQAEGLSLQPYEEYLNVVRLVPENFRDLNKKREID
RDQLMTVLANVTHLLIRANYNSAKRALYRLDSVSLDTASPNVIDLALATEVEHCECPQGY
AGISCESCFPGYYRVDGILFGGICQPCDCHGHAAECDIHGVCLACEHNTTGDHCEQCAPG
FYGLPSRGTPGDCQRCACPLTTASNNFSPTCHLENGDEVVCDQCAPGYSGAWCERCADGY
YGNPTVPGESCVPCNCSGNVNPFEEGHCDSVTGECLKCIGNTDGAHCERCADGFYGDAVT
AKNCRACECHRKGSLSDVCHLETGLCDCKPHVTGRQCDQCLPGYYGLDAGLGCLPCDCNV
SGSVSDDCSEDGQCRCVPSVAGEKCDRCAHGFYAYQDGGCTPCDCAHTQHTCHPESGECI
CPPHTRGTTCDECEDGYWGHDLELGCQACNCSGAGASSPGCNVLTGHCHCKPAFGGPSCH
QCSLGYRDFPDCVACDCDLRGTLAGTCDEERGLCTCAAETGSCSCKENVLGLHCSKCQAG
TYALRAEDPLGCTPCFCFGLSQVCSELEGYVRTPVTLGSGQPLLRVVSQSNLRGTTEGVY
YQAPDVLLDAVTVRRHVHAEPFYWRLPEWFQGDQLLAYGGSLKYSVAFYSSDGVGTFNLE
PQVLIKGGRTRKQVIYVDLPAPENGVRQEQEVGMKENFWKYFNSVSEKPVTRPDFMSVLS
NIEYILIKASYGQGLQQSRISNISMEVGRKAADSPPGQEVASLLEKCLCPPGTAGFSCQD
CAPGYHRGKLPQGRSRGPHPLLAPCVPCSCNNHSDTCDPETGKCLNCRHSTAGDHCNVCA
PGYYGKVTGSVGDCSPCACPRSGPASFSPTCILEGDADFRCDACVLGYEGQYCERCSSGY
HGNPRVPGGTCQRCDCSPHGSVHGDCDRRSGQCICRPGATGLRCQECKPRHILLESDCVS
CDDECVGVLLNDLGNIGDTILSVNLTGIIPVPYGILSTLENTTKSLREALLKENPQKELA
KDQLEGVAEQTDSLRRELARVLTSSQNVTRETERILSRTQDLLTFSEKLQINIQEMIEKA
ATLNQTLDEDFQLPSSALQNMQKNITSLLETIQKRHFMHLYQNAILELKAAEDVLSRIQK
NYQKPQKELEVFKAAASSLLSKHTSELQTAGDLTREAEARTRETNRLLRIVRANLHEFHE
KKRLVEEEQNLTSTLIARGRRLLEAVTARAEAAQKALAQLEHHRDELLLWTAKIRHHVDD
LVMQMSKRKALDLVYRAEDHAAELQRRARALASGLGNVRHVSLNATSATHVHSNIRSLIE
ESEKVAKDALEMVTTTSLFPESLVSKGKAALQVSSRFLKEGKSLSRKHQGIALELNELKN
TANRVQENADTITRRTNESLLTLTAIPEGIQGKGTKVKELAASANQSAASTLKDVVGLSQ
KLLNTSTDLSRVDATLRETNRLLQDSSMTTLLAGRRVKEAETQASLLFDRLKPLKILEEN
LSRNLSEIKLLISQARKQAASIKVAVSADRDCIRAYQPPISSTNYNTLTLNVKTSEPDNL
LFYLGSSTSSDFLAVEMRRGKVAFLWDLGSGSTRLEFPDFPIDDNKWHSIYVTRFGNIGS
LSVKEMSAAQKPPTKTSKSPGTANVLDINNSTLMFVGGLGGQIKKSPAVKVTHFKGCMGE
AFLNGQSIGLWNYIEREGKCHGCFGSPQNEDSSFHFDGSGYSVVERTLRTTGTQIIMLFS
TFSPNGLLLYLTSNGTKDFLSIELVHGRVRVTVDLGSGPLALTTDRRYNNGTWYKIAFQR
NRKQGILAVIDAYDTSYRETKQGETPGASSDLNRLDKDPIYVGGLPRSRIVRRGVTSKSY
VGCIKNLEIARSTFDLLRNSYGVRKGCILEPIRSVSFLKGGHVELSPKPLSPESELLATF
ATKNSSGIILVALGRQGEKQGHLPAHGQPSQPFFSIMLIEGHIEVHINSGDGTSLRRALL
RAPKGTYGDGREHSISLIRTGRVITIQMDETNPIEMKLGPSAESKAINVSKLYIGGIPEE
EGNSVLKMRKSFHGCIKNLIFNMEHLDFTSAAGNEQVDLDTCLLSERPKLTLHGEESERL
PELRPLPRLEQCAMDRAPDHIPSAHQFGLMQSSHFVLPFNQLAVRKRLSVQLSIRTFASS
GLIYYMAHQNQVDYATLQLHGGHLHFLFDLGKGRTTVSHPALINDGRWHTVKTEHFKRKG
FMMVDGQEAPTVTAVGDGTMLDVEGKLYLGGLPSDYRARNIGNITHSVPACIGEVTVNGK
QLDKERPVSAFSVTRCYAVVQEGTFFEGSGYAALVKEGYKVRSDVNITLEFRTTSENGVL
LGISSAKVDAIGLEIVNGKILFHVNNGAGRITATYKPKTTTALCDGKWHTLQAQKSKHRL
VLIVDGNAVRAESPYTQSTSADTNNPIYVGGYPADVKQNCLSSQTSFRGCLRKLTLIKGP
QVQSYDFSRAFDLQGVFPHSCPGSEP
NT seq
9261 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcggcggccgcgcgggggtcgcgctcctggcctcgctgctctgggtcgccgcg
cggtgccagcagagagggctgtttcctgccattctcaatcttgccagcaatgcacacatc
agcaccaatgcgacctgtggtgagcaagggcccgagatgtcctgcaagcttgtggagcac
gtgccaggtcgtcccgtgcgcaacgcccagtgccagatctgtgatgccaacagtgccaac
cccaaagaacgccatccaatatccaacgcaatcgacgggactaataactggtggcaaagt
cccagtattcaaaacgggagagaatatcactgggtcacgatcactctggacctaagacag
gtctttcaagtcgcctacgtcatcatcaaagctgctaatgcacctcgacctgggaactgg
attttggaacgttctctggacggcaccacgttcagcccctggcagtattatgcagttagt
gacacagagtgtttgactcgttacaatatcactccgagacgggggccgcccacctacagg
gctgatgacgaagtgatctgcacctcttactattctcgcctggtaccccttgagcatgga
gagattcacacatcactaatcaacggcagaccaagcgctgatgatctttcacccaagctg
ttggagtttacttccgcccgatacattcgccttcgcttacagcgcattagaaccctcaat
gccgatctcatgaccctcagccaccgtgatcctaaagaccttgatcctattgttacaaga
cggtattactattcaatcaaagacatttctgttggaggaatgtgtatttgttatggacat
gccagtagctgcccctgggatgaaactacaaagagactacagtgtcagtgtgagcataac
acctgtggagagagctgcagccggtgttgcccggggtaccaccagcagccctggcggccc
ggcaccgtttctgccgggaacacatgcgaaaaatgtaattgtcacaataaagcccaagac
tgttactatgatgaaagtgttgccagtcagaggaggagtttgaatactgctggacagttc
caaggaggcggggtttgcatcaattgcctgcagaataccatggggatcaattgtgagacc
tgtattgatggatattatagaccatacaaggtgtctccttatgaagacaacccttgtcgt
ccctgtgactgtgacccttttgggtccctcagttcagtctgtattaaagatgagctccaa
tcggacttacacaaagggaagcggccaggtcaatgcccatgcaaggaaggctatgcagga
gaaaaatgtgatcgctgccagtttggttacaaggcttacccagcctgcatccgctgtgag
tgtagtcgggctgggagtgtgaacgaggacccatgctcagagccttgtctctgtaaggaa
aatgttgagggagacaattgtgacctctgcaagccaggattctataacttgaaggagaga
aaccctgagggctgctcagagtgcttctgctttggtgtttctgatgtctgcgacagcctt
tcttggtccatcagtcaggtgagagatatgtctgggtggctggtcactgacctggtcagt
ccaagcaagatcccatctcagcaagacgcgctgggtgggcatcactggatcagcatcaac
aacacggtggtctcacagaggctgacttccaagtattactggtcagccccagaggcctac
ctcggaaataagctgactgcatttggtggcttcctcaagtacacggtgtcttacgatatt
cccgtggagacagtggatggagacctcatgtctcacgctgatgtcatcattaagggaaat
ggactcactttaagcacccaggctgaggggctgtcattacaaccctatgaagagtacttg
aacgtggtcagacttgtgccggagaacttccgagatcttaataaaaaaagggagatagat
cgcgaccagctgatgactgtccttgccaatgtgacgcatcttttgatcagagccaactac
aattctgcaaaaagggctctttacaggttggattctgtctctttggatacagctagccct
aatgtcatagacctggccctggccactgaggtggaacactgcgaatgtccccaaggctac
gcagggatctcctgtgagtcctgcttccctggctattaccgcgtggatggaatactcttc
ggaggaatttgtcaaccctgtgattgccacggccatgcagctgaatgtgatatccatggt
gtttgccttgcatgtgagcataacaccactggagaccactgtgagcagtgtgcgcccggc
ttctacgggctgccttcccgagggactccgggggactgccagcggtgtgcctgccccctc
accacagcctccaacaatttcagccctacctgccacctagagaatggggacgaagtggtc
tgtgaccagtgcgccccgggatactcgggagcttggtgcgagagatgtgcagacggttac
tatggaaacccgacagtccctggggaatcctgtgtcccctgcaactgcagtggcaacgtg
aaccccttcgaggagggtcactgtgactccgtcactggagagtgcctgaaatgcattggg
aacacggatggcgcccactgcgagaggtgtgctgacggcttctacggggacgctgtgacc
gccaaaaattgccgcgcctgtgaatgccacaggaaaggctccctttctgatgtctgccat
ctggagactggactctgtgactgcaaaccacatgtgactggacggcagtgtgaccagtgc
ctgcctggctattatgggttggacgcggggctcgggtgcctgccttgtgactgcaacgtg
tcaggctctgtgtcagacgactgctccgaggatggccagtgtcgctgcgtccccagcgtg
gctggggagaagtgcgacaggtgtgcacacggattctacgcctaccaggatggcggctgt
acaccctgtgactgcgctcacacacagcacacttgtcaccctgaatcgggggagtgtatc
tgccctcctcatactcggggcaccacctgtgatgaatgtgaggacggatactggggccac
gacctagagctcggatgccaggcctgcaactgtagtggggctggggcctccagtcccggc
tgcaatgtgctcactggccactgccactgtaagccggccttcggcggacccagctgtcat
cagtgctccctggggtacagagactttccagactgtgtggcctgtgactgtgacctgcga
gggacattggcgggcacctgtgatgaggaacggggtctgtgcacctgtgcagcagaaacc
ggtagctgctcctgcaaggaaaacgtgttgggtcttcattgcagcaagtgtcaagctggg
acctatgccctccgtgccgaagaccctctgggatgtaccccctgcttctgcttcgggctg
tcccaagtctgctccgagctggagggttatgtgaggacaccggtgacgctgggctcaggg
cagcccctcctgcgagtggtttctcagagcaatctccggggcacgactgagggggtgtat
taccaggcccctgatgtcctcctggacgccgtcaccgtcaggcggcacgtccacgcagag
ccgttttactggcggctgccagagtggttccagggagaccagctcctggcctacggcggc
agcctgaagtacagcgtggctttctattcttccgacggcgtcggcaccttcaaccttgag
ccccaagtgctcatcaaaggaggccggaccagaaagcaggttatttacgtggacctgccc
gccccggagaacggagtacgacaagagcaggaagtgggaatgaaagagaacttttggaag
tattttaactccgtttctgaaaaacctgtcacgcgcccggatttcatgtctgtccttagc
aacattgagtacatcctcatcaaagcatcttacggtcaaggattacagcaaagcagaatc
tcaaatatttccatggaggttggcaggaaggctgcagattcgcccccaggacaggaggtg
gcgtccctcctagagaagtgtctctgtcctcctggcacggctggattttcgtgtcaggac
tgtgcacctggttaccacagggggaagctcccacaaggcaggagccgaggaccccaccct
ctgcttgccccttgcgtaccctgcagttgcaacaaccacagtgacacctgtgacccagaa
actgggaagtgtctgaactgtaggcacagcaccgccggggaccactgcaatgtgtgcgcc
cctgggtactacgggaaggtgactggctccgtgggtgactgctctccatgcgcctgtccc
cgcagcggccccgccagcttcagccccacttgcatcttggaaggtgatgctgatttccgc
tgtgatgcctgtgttctgggctacgaaggacagtactgtgaaaggtgctcctccggctat
cacgggaaccctcgagtgccgggtggcacctgccagaggtgtgactgcagcccgcatggc
tccgtgcacggggactgtgaccgcaggtccgggcagtgcatctgcagaccaggcgccacg
gggctccgatgccaggaatgcaaaccgaggcacattctactggaaagcgattgtgtctct
tgtgatgatgagtgtgtaggcgtgctgctgaatgacttagggaatattggtgacaccatc
ctctctgtgaacctcactggcattatccctgtcccatatggaattttgtcaaccctggaa
aatacaacaaaatctctccgggaggctttattaaaagaaaacccacagaaggaactggcc
aaagatcagcttgaaggtgtagcagaacagacagacagtctgcgaagggagctcgccaga
gtgttgacgagtagccaaaatgtaaccagggagactgaaagaatcctcagcaggactcaa
gacctcctgacattttctgagaaactgcagataaatatccaagaaatgattgaaaaagca
gcaactctaaatcagaccttggatgaagatttccagctacccagttctgctcttcagaat
atgcaaaagaatattacatctctcctggaaaccatacagaaaaggcatttcatgcatttg
taccaaaatgccatactggaactcaaggctgctgaagatgtgttatcacgaattcagaag
aattaccagaagccacagaaggagctggaggtcttcaaagcagcagcgagcagcctcctt
tcaaaacacaccagtgagctgcagacagcaggagacctgacaagggaggcagaggcgagg
acccgggaaaccaaccgcctgttgcgcattgtccgtgccaacctgcacgaattccacgaa
aagaagcggcttgttgaagaagaacagaacttgacctcgacgctaattgccagagggaga
agattgctagaggctgtcaccgcccgtgctgaggcagctcagaaggctctggcacagtta
gaacatcaccgggatgagctgcttctgtggactgccaaaatcaggcaccacgtggatgat
ctggtcatgcagatgtccaaaagaaaagcacttgacctcgtctacagagcagaggaccat
gcagctgagctccagagacgagcacgtgctctggccagtggtcttggcaacgtgagacac
gtgtccctgaatgccaccagcgcaacgcacgttcattccaacattaggagcctgattgaa
gaatcagagaaagtggcaaaagatgctcttgagatggtgactacgacgagcctgttccca
gaatcccttgtttctaaggggaaagcggctctccaggtcagctccagatttctaaaagaa
ggcaaaagcctgagcagaaagcatcaaggtatcgcattggaactgaatgaattgaaaaat
acagcaaacagagttcaagagaatgctgatacaattactaggaggaccaatgaatcactc
ttaacactcacagcaattcctgaaggtatccaaggcaagggaaccaaagtcaaagagctg
gccgcatctgcaaatcagagcgcagcaagcaccctaaaggacgtcgtgggattgagccag
aagctgctgaacacatccaccgacctgtccagggttgacgccaccttacgagaaaccaac
agacttctacaggactcctcaatgaccactctgctagctggaagaagagtgaaagaagcc
gagacacaagccagccttttatttgatcggttgaagcctttgaagatattagaagagaac
ctgagcagaaacctatcagaaatcaaactgctcatcagccaggcccggaagcaagcagct
tctatcaaagtcgccgtgtctgcagaccgagattgcatccgggcctaccagcctccaatt
tcttctaccaactataacaccttaacgctcaatgttaagacaagtgaacccgataacctt
ctcttctacctggggagcagcaccagttctgatttcttggcagtggagatgcggcgaggg
aaggtggcctttctctgggatctgggctccgggtccacgcggttggaatttccagacttc
ccaattgatgacaacaaatggcacagtatctatgtaaccagatttggaaacatcggttca
ttgagtgtaaaagaaatgagcgcagctcagaaaccaccaacaaaaacaagtaaatcccct
ggaaccgccaatgttctcgatataaacaactcaacgctcatgtttgttggagggcttgga
ggacagatcaagaagtctcctgctgtgaaggttacccattttaaaggctgcatgggagag
gccttcctgaacggacagtccatcggcctgtggaactatattgaacgggagggcaagtgc
catggctgctttggaagcccccagaatgaagactcctccttccattttgatgggagtggg
tattcggtcgtggagagaacgctccggacgacggggactcagataattatgctttttagt
accttttcacccaatgggcttcttctctatctcacttcaaatggcactaaagacttttta
tccatcgagctggtacatggcagagtcagagttacagtagacctgggctcagggcctctt
gcccttactacagacagacgctataacaatggaacctggtacaaaatcgccttccagaga
aaccgaaagcaaggaatcctagcagttatcgatgcatatgacaccagttatagagaaacc
aagcaaggcgaaactccaggagcgtcttcggatctcaatcgtctagataaagatccaatt
tatgtgggtggattacctaggtcaagaattgtaaggagaggtgtcaccagcaaaagctat
gtgggctgtatcaaaaacctggaaatagccagatcaacttttgatttactcagaaattcc
tatggagtgagaaaaggctgtatattggagcctatccgaagtgttagcttcttgaaagga
ggccacgttgaactgtcacccaagcctttgtcaccagaatcggaattgttggccacattt
gccaccaagaacagcagtggcatcatcctggttgccctgggcagacagggggagaagcag
ggtcatctaccggcccatgggcaaccttcccagcccttcttttccatcatgctgattgag
ggccacatagaagtgcatattaactctggggacggaacaagcctgagaagagctctcctg
cgtgctcccaagggcacatatggcgatggacgagaacattccatttccctgataaggact
gggagagttatcactatccaaatggatgagaccaatcctatagaaatgaagttgggcccc
tcagcagaaagcaaggcaataaatgtatccaagctgtacataggggggattccagaggag
gaggggaactcagtgctcaagatgagaaaatcattccatggctgtataaaaaacctgatc
tttaatatggaacatttggatttcacaagtgcggctggcaatgaacaggtggacttggac
acctgcttgctttcagaaaggccgaagctcactcttcacggagaggagagtgagcgcctg
ccagagctccggcctttaccacgtctggaacagtgtgctatggacagagccccagaccat
atccccagtgctcaccagtttggcctcatgcaaagcagccatttcgtgttgcctttcaat
cagctggctgtcagaaagaggctctcagttcagctaagtatccgaacattcgcctccagc
ggtctgatttactacatggctcatcagaaccaagttgattatgccacactccagctgcac
gggggccaccttcacttcctgtttgatcttgggaaaggcagaacaacagtttcccaccct
gccctgatcaatgatggcagatggcacacggtcaagacagagcactttaaaagaaagggc
ttcatgatggtcgatggccaggaggcccccacggtgactgcggtgggagatgggaccatg
ttggatgtggaaggaaagctgtacctaggaggccttccctctgactacagggccaggaac
attgggaatatcacccatagtgtccctgcctgcatcggggaggtgacagtgaatggcaaa
cagctggacaaggaaaggccagtgtctgcattttcagtaactaggtgctatgcagtggtc
caggaaggaactttctttgaaggaagtggatatgcagctcttgtcaaggaaggctacaaa
gtccgatcagatgtaaacatcacactggaatttcgtaccacctctgaaaacggtgtcctt
ctggggatcagcagcgccaaagtagatgccatcggattagagattgtaaatggcaagatc
ttgtttcacgttaacaatggtgccggtaggataacagccacatacaagcccaaaactacc
actgctctctgcgatggaaaatggcacacacttcaagctcagaaaagcaaacaccgcttg
gttctgattgttgatgggaatgcagttcgtgctgaaagtccgtacacccagtccacctcg
gcagacaccaacaatcctatttatgtcggtggctatcctgctgacgtgaagcaaaattgc
ctgagcagccagacctccttccgggggtgtttgagaaagctcactctgattaagggccca
caagtacaatcctatgacttcagcagagcttttgacctgcaaggagtgttccctcattcc
tgtcctgggtctgaaccctga
DBGET
integrated database retrieval system
