Lutra lutra (Eurasian river otter): 125082447
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Entry
125082447 CDS
T08100
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
125082447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125082447
Transcription factors [BR:
llv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
125082447
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Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Prok-RING_1
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
125082447
NCBI-ProteinID:
XP_047554083
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All DBs
Position
12:complement(88126202..88134732)
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AA seq
402 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGGNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGA
LHPLPGEVFSGGPSPPFPMSGASGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgccggctgcgagcggcccatcctagaccgcttcctgctgaacgtg
ctggaccgcgcgtggcacatcaaatgcgtacagtgctgcgagtgtaagaccaacctctcg
gagaagtgcttctcgcgcgagggcaagctctactgcaaaaatgacttcttcaggcgcttt
ggcacaaagtgtgcgggctgtgcgcaaggcatctcgcccagcgacctggtgcgcaaggcc
cgcagtaaggtcttccacctaaactgcttcacctgcatggtgtgtaacaagcaactgtcc
acgggcgaggagctctacgtcatcgacgagaacaagttcgtgtgcaaggacgactacctg
agctcctccagcctcaaggagggcagcctcaactccgtgtcatcctgtacggaccgcagt
ttgtccccggatctccaggacccactccaggacgaccccaaggagacggacaactcgacg
tcgtcggacaaggagacagccaacaacgagaacgaggagcagaactccggcacgaagcgg
cgcggcccgcgcaccaccatcaaagccaagcagctggagacgctcaaggccgcctttgcc
gccacgcccaagcccacgcgccacatccgcgaacagctggcgcaggagaccggcctcaac
atgcgcgtgatccaggtgtggttccagaaccgaaggtccaaagaacgcaggatgaaacag
ctgagcgcactgggcgcccggagacacgccttcttccggagtccgcggcgcatgcgtccg
ctgggcggccgcttggacgagtctgagatgttggggtccactccgtacacctactacgga
gactatcaaggcgactactacgcgcccggaggcaactacgacttcttcgcgcacggcccg
ccgtcgcaggcacagtccccggccgactcgagcttcctggccgcgtcgggacccggctcg
acgccgctgggagcgctggagccgccgctggccggcccgcacgccgccgacaaccccagg
ttcaccgacatgatctcgcacccggacacgccaagccccgagccgggcctgcccggcgcg
ctgcaccccctgcccggcgaggtgttcagcggcgggcccagcccgcccttccccatgagc
ggcgccagcggctacagcggacccctgtcgcaccccaaccccgagctcaacgaggccgcc
gtgtggtaa
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