Lutra lutra (Eurasian river otter): 125082605
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Entry
125082605 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: SNW domain-containing protein 1-like
KO
K06063
SNW domain-containing protein 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03040
Spliceosome
llv04330
Notch signaling pathway
llv05169
Epstein-Barr virus infection
llv05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125082605
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125082605
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
125082605
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
125082605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llv03041
]
125082605
Spliceosome [BR:
llv03041
]
Complex B
Other components
Prp19-related factors
125082605
Complex C
125082605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
NQRA_N
SIR4_SID
Motif
Other DBs
NCBI-GeneID:
125082605
NCBI-ProteinID:
XP_047554346
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All DBs
Position
12:complement(58571892..58573994)
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AA seq
536 aa
AA seq
DB search
MALTSFLLALTQLFQDQLEAEEKAXSQGSRQTSLVSSRREPPPYGYWKGWIPRLLEDFGD
GGAFPEIHVAQYPLDMGRKKKMSNALAIQVDAEGKIKYDAIAQQGPSKDKVIYSKYTDLV
PKEVMNADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAPAMPVRAADKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPSSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADWKAGE
AVEMRAQVERKMAQKEKEKHEEKLREMAQTARERRAGIKTNVEKEDGEARERGEIRHDRQ
KERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRTSNEVQYDQRLFNQSKGMDS
GFAGGEDEIYNVYDQAWRGGKDMAQNIYRPSKNLDKDIYGDDLEARIKTNRFVPDKEFSG
SDRRQRGREGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaccagctttttacttgcacttactcagctatttcaggaccagcttgaggct
gaagaaaaggcanagtcccagggatcacgacagacctcactagtctcctcccgaagagaa
cctcccccgtacgggtactggaagggctggatacctcggttattagaggattttggagat
ggaggtgcttttccagagatccatgtggcccagtatccactggatatggggcgaaagaaa
aaaatgtcaaatgcactggccattcaagtggatgctgaaggaaaaattaaatatgatgca
attgctcagcaaggaccgtcaaaagacaaggtcatttatagcaagtatactgacctggtt
cccaaggaagtcatgaatgcagatgacccagacctgcaaagacctgatgaagaagccatt
aaagagataacagaaaagacaagggtagccttagaaaaatctgtatcacagaaggttgcc
cccgccatgccagttcgagctgctgataaactggctccagctcagtatattcgatacaca
ccatctcaacaaggagtggctttcaattctggagctaaacagagagttattcggatggtg
gaaatgcagaaagatccaatggagcctccaaggttcaaaatcaataagaagattccccga
ggaccatcttctcctcctgcacctgtcatgcattctcctagccgaaagatgactgtgaag
gagcaacaagagtggaagattcctccttgtatttcaaactggaaaaatgcaaaggggtat
acaattccattagacaaacgtctagctgctgatggaagaggccttcagacagttcacatc
aatgagaactttgccaagctggccgaagccctctatattgctgattggaaggctggtgaa
gctgtagaaatgcgcgctcaagtagagagaaagatggctcaaaaagaaaaggagaaacat
gaagagaaacttagagaaatggcccagacagccagggagagaagagctgggatcaaaacc
aatgtggaaaaagaggatggggaggcacgtgagaggggtgaaatccggcatgacaggcaa
aaagagagacagcacgacaggaatctttccagggcagctcctgataagaggtcgaaacta
cagagaaatgaaaatcgagatatcagtgaagtcattgctcttggtgtgcccaatcctcga
acgtccaatgaagttcagtatgaccaaaggcttttcaaccaatccaagggtatggacagt
ggttttgcaggtggagaagatgaaatttacaacgtttatgatcaagcctggagaggtggc
aaagatatggcccagaatatttataggcccagtaaaaatctggacaaagacatatatggt
gatgacctagaagccagaataaagaccaacagatttgttcccgataaggagttttctggt
tcagaccgcagacaaagaggccgagaaggaccagttcagtttgaggaagatccttttggt
ttggacaagtttttggaagaagccaaacagcacgggggctctaaaagaccatcagatagc
agccgccccaaggaacatgagcatgaaggcaagaagaggagaaaggagtag
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