Lutra lutra (Eurasian river otter): 125082631
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Entry
125082631 CDS
T08100
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125082631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125082631
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125082631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
125082631
NCBI-ProteinID:
XP_047554386
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All DBs
Position
12:complement(93660529..93683192)
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AA seq
362 aa
AA seq
DB search
METDAPQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRS
RGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNT
TVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYASRSYTGLAPGYT
YQFPEFRVERTPLPSAPVLPELTAIPLTAYGPMAAAAAAAAVVRGTGSHPWTMAPPPGST
PSRTGGFLGTTSPGPMAELYGAANQDSGVSSYISAASPAPSTGFGHSLGGPLIATAFTNG
YH
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggagactgacgcgccccagcccggcctcgcctccccggactcgccgcacgacccctgc
aagatgttcatcgggggactcagttggcagactacgcaggaagggctgcgcgaatacttc
ggccagttcggggaggtgaaggagtgtctggtgatgcgggaccctctgaccaagagatcc
aggggtttcggcttcgtcactttcatggaccaggcgggggtggataaagtgctggcgcag
tcgcggcacgagctcgactccaaaacaattgatcccaaggtggcctttcctcggcgagca
cagcctaagatggtgactcgaacgaagaagatctttgtgggggggctgtcagtgaacacc
acggtggaggacgtgaagcagtattttgaacagttcgggaaggtggacgatgccatgttg
atgtttgacaaaaccaccaatcggcaccgagggttcgggtttgtcacgtttgagagcgag
gacatcgtggagaaagtgtgtgaaatccacttccatgaaatcaacaacaaaatggtggaa
tgtaagaaagctcagccaaaagaggtgatgtcgccaacgggctcagcccgggggaggtct
cgagtcatgccctatgggatggacgccttcatgctgggcatcggcatgctgggttacccc
ggtttccaggccacaacctatgccagccggagttacacaggcctcgcccctggctacacc
taccagttccctgaattccgtgtagagcggacccctctcccgagcgccccagtcctcccc
gagcttacagccattcctctcactgcttatggaccaatggcggcagcggcagcggcggcg
gctgtggttcgagggacaggctctcacccctggacgatggctccccctccaggttcaact
cccagccgcacagggggcttcctggggaccacaagccctggcccaatggccgagctctat
ggggcagccaaccaggactcaggggtcagcagttacatcagcgctgctagccccgccccc
agcaccggctttggccacagtcttgggggccccttgattgccacagctttcaccaatggg
taccactga
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