Lutra lutra (Eurasian river otter): 125082978
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Entry
125082978 CDS
T08100
Name
(RefSeq) dynein axonemal intermediate chain 1-like
KO
K10409
dynein axonemal intermediate chain 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04814
Motor proteins
llv05014
Amyotrophic lateral sclerosis
llv05016
Huntington disease
llv05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125082978
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125082978
05016 Huntington disease
125082978
05022 Pathways of neurodegeneration - multiple diseases
125082978
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
llv03037
]
125082978
04812 Cytoskeleton proteins [BR:
llv04812
]
125082978
Cilium and associated proteins [BR:
llv03037
]
Motile cilia and associated proteins
Dynein arm
125082978
Cytoskeleton proteins [BR:
llv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
125082978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR5
Beta-prop_HPS5
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_LRRK2
DUF4191
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
125082978
NCBI-ProteinID:
XP_047554844
LinkDB
All DBs
Position
13:58302655..58343537
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AA seq
781 aa
AA seq
DB search
MSPPRPSPRPRSLPAAPAAARRGGLCRGRSAASRHLLPLGRCLLRGRGCSLARSAEFGRR
LRPGRGVRLGSAALGYVRLRSAGLGWARQAAKTAEDLASWRPAAARGQFRTDVGEGADEW
AQSKATVRPPDQLELTDAELKEEFTRILTANNPHAPQNIVRYSFKEGTYKLIGVVNQLAV
HFSQVGNLIPKDSDEGRRQHYRDELAAGSQESAKVVISETEILEEEEEPKETEAETELGS
QTDVPATEAAAKATEEELMTPKQPKERKLTNKFNFSERASQTLNNPLRDRECQMEPPPRT
NFSATANQWEIYDAYVEELKKQEKTKEKEKAKTPVAKKMGKMTMRKMTSMESQSDDITKV
TQAAKIVERMVNQNTYDDVAQDFKYYEDAADEYRDLEGTLLPLWKFQNDKAKRLAVTALC
WNPKYNDLFAVGHGSYDFMKQSRGMLLLYSLKNPSFPEYIFSSESGIMCLDMHVNHPYLV
VVGHYDGNVAIYNLKKPQSQPSFRSSAKSGKHTDPVWQVKWQKDDMDNNLNFFSVSSDGR
IVSWTLLKSELVHTDVIKLKAEGNTTDGLNGLQIHTVGCGTAFDFHKEIDYMFLVGTEEG
KIYKCSKSYSSKFLDTYDAHNMAVDAVSWNPYHAKVFMSCSSDWTVKIWDHTIKTPMFIY
DLNSAVGDVAWAPYSSTVFAAVTTDGKTHVFDLSINKYEAICSQPVVAKKKNKITHVQFN
PIHPIIIVGDDRGHVICLKLSPNLRKMPKEKKGQEVQKGPAVEIAKLDKLLNLVREVKTK
T
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctccccggccctcccctcggccgcgcagcctgccggccgctcccgccgccgcg
cgacggggcggcctctgccgcgggcggtctgcggcgagccggcacctcctccccctgggg
cggtgcctcctccgcggccgcggctgctcgctagctcgttcggcggagttcgggcggcgg
ctgcggccggggcgcggtgttcggctaggctcggctgcgctcggctacgttcgactacgt
tcggctgggctcggctgggctcggcaggcagcaaaaacagcggaggacctcgcttcctgg
aggccggcggcggcccgcggccaattcaggactgatgtgggggaaggagcagatgaatgg
gcccagtccaaagccacagtcagaccccctgaccagctggagctgaccgatgcggagcta
aaggaagagttcacccgcattctgaccgccaacaacccacacgcaccccagaacatcgtc
aggtacagcttcaaagaaggcacgtataagcttattggcgtggtgaaccaactggcagtt
cacttcagccaggttgggaacctgatccccaaagactcggatgaaggacggcggcagcac
taccgtgatgagttagcagcaggttctcaggagtctgccaaggtggtgatttcagaaacc
gaaatcctcgaagaagaagaagagcctaaggaaacagaagctgaaactgaacttgggagt
caaacagatgtgcctgccactgaggcagctgcaaaagcaactgaagaagaattgatgact
cccaagcagcccaaggagcgaaagctcaccaacaagttcaacttcagtgagagggcctca
cagaccttaaacaatcctctccgggaccgagaatgccagatggagcctcctcctaggaca
aacttttcagccacagccaatcagtgggagatctacgatgcctatgtagaggaacttaag
aagcaggaaaagaccaaagaaaaggagaaggcaaagacaccagtggctaaaaaaatgggg
aagatgaccatgaggaagatgacatctatggagtcccagagtgatgacatcaccaaagtg
actcaggctgctaaaattgtggagcggatggtcaaccagaacacatatgatgatgttgct
caagattttaagtactacgaggatgctgctgacgaataccgagacctggagggtacgctg
ctgccgctctggaagttccaaaacgacaaagccaagcgcctggctgtcaccgccctctgc
tggaatccaaagtacaatgatctgtttgcagtgggacatggttcctatgacttcatgaag
cagagccggggcatgctcctgctgtacagcctgaagaaccccagctttcccgagtacatc
ttcagcagtgagagtggcatcatgtgtctagacatgcacgtgaaccacccttacctggtg
gtggtgggccactacgatgggaacgtggctatttacaacctcaagaagccccagtcccag
ccgtccttccgcagctcagccaagtccggcaagcacacggacccggtgtggcaggtcaag
tggcagaaggatgacatggacaacaacctcaacttcttctctgtgtcatctgacggcagg
attgtgtcttggaccctcttgaagagtgagctggttcacacagatgtcatcaagctgaag
gcggagggcaacaccacagatggcctcaacgggttgcagatacacacagtgggctgtggc
accgcctttgacttccacaaagagattgactacatgttcctagtgggcacagaggaggga
aaaatctacaagtgctctaagtcctactccagcaagttcctcgacacctatgatgcccac
aacatggcagtggacgctgtgtcctggaacccataccatgccaaggtcttcatgtcctgc
agctccgactggactgtgaagatctgggaccacaccatcaagaccccgatgttcatctac
gatctaaattcagctgtgggtgatgtggcctgggcgccgtactcttctactgtgtttgca
gcagtcaccactgatgggaagacccatgtgtttgacttgtctatcaacaagtatgaggcc
atctgcagccagcccgtggtggccaaaaagaagaacaagatcacccatgtgcagttcaat
cctatccatcccatcatcattgtgggtgatgaccgtgggcacgtcatttgcctcaagctc
tcacccaacttgcgcaagatgccgaaggaaaagaagggacaggaggtacagaagggtcca
gctgtggagatcgcaaaattggataaactgctgaacctggtgagggaagtgaaaaccaag
acctga
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