Lutra lutra (Eurasian river otter): 125083124
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Entry
125083124 CDS
T08100
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125083124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125083124
03016 Transfer RNA biogenesis [BR:
llv03016
]
125083124
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
125083124
Transfer RNA biogenesis [BR:
llv03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
125083124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_3
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
125083124
NCBI-ProteinID:
XP_047555039
LinkDB
All DBs
Position
13:60663987..60917311
Genome browser
AA seq
546 aa
AA seq
DB search
MMFGGYETIEAYEDDLYREESSSELSVDSEVEFQLYSQVHYAQDLDNIIREEEYEEKNSG
NSESSSSKPNQKNLIILSDSEVIQLSDGSEVITLSDEDSIYRCKRKNFGVQAKEKTGGPP
ASLHSNKLTDKKCKRNFEKPKPEEIPGTIREVMIIEVSSSEEEESTISESDNVENWMLLG
CEVDDKDDDILLNLVGCENSVNEGEDAVSWFISDKDAEAQIVNNRASGRWTHRYYSANKN
VTCRNCDKCGHLSKNCPFPQKVRPCCLCSERGHLQYACPARFCLGCSLPMSSTHRCLERP
SWRKRCDRCDMIGHYADACPEIWRQYHLTTKPGPPKKPKTPSGQSALVYCYNCGQEGHYG
HECTERRMFNQTFPTSPFIYYYDDKYEIREREQRIKRKVKELQKNGDFPRQFKRPHMEVA
DTRSHHNRRKSHASRKNNRWPQEKKEIQKEASRSSKEREKHRKADRCHEADEDFPRGPKL
HSSPGSFKTQKAPKSFHHSSHSHKPREDKPPREGKRNKHKKKESYLEADGNDNLFLIKQR
KKKSKL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttggtggttatgagaccatagaagcctatgaagatgacctttatcgtgaagag
tcatctagtgaactgagtgttgatagtgaggtggaatttcagctctacagccaagttcat
tacgcccaagatcttgataatatcattagagaggaagaatatgaagagaagaactctggg
aattctgaatcatccagtagtaaaccaaatcaaaagaacttaattatcctttcagatagt
gaggtcatccagctatcagatgggtcagaggtcatcactttgtctgatgaagatagtatt
tacagatgcaaaagaaagaattttggagtccaagcaaaagaaaagaccggaggtcctcct
gcctctcttcattctaataagttgactgataagaaatgcaagaggaattttgagaagcct
aaacctgaagagataccgggtacaatcagagaggttatgattatagaggtcagttcaagt
gaagaggaagagagcaccatttcagaaagtgataacgtggaaaactggatgctgctggga
tgtgaagttgatgataaagatgatgatatccttctcaatcttgtcggatgtgaaaactct
gtaaatgaaggagaagatgctgtaagttggttcatcagtgacaaagatgcagaggcccag
atagttaataatagagcatctggaagatggacccaccgatactattcagccaacaaaaat
gttacctgtagaaattgtgacaaatgtggccatttatcgaaaaactgcccctttccacaa
aaagtccgcccctgctgtctctgttccgagagaggacacctccaatatgcctgcccggcc
cgcttttgcttaggctgttctttgcctatgtcttccactcacagatgtctcgaaagacct
tcttggagaaaaagatgtgaccgatgtgatatgataggccactatgctgatgcttgccca
gaaatctggaggcagtatcacctaacgaccaaacctggaccacccaaaaagccgaagacc
ccttctggacaatcagccttagtgtattgctacaactgtgggcaagaaggccattatgga
cacgaatgtacagaaagacgaatgtttaaccagacctttccaacgtctccattcatctac
tactatgatgacaaatatgaaattcgggagagagaacagagaataaaacgaaaagtgaaa
gaactccagaagaatggggatttccctaggcagttcaagagacctcacatggaagttgca
gatacgcggtcccaccataacaggaggaagagccatgcctcccgtaaaaataacaggtgg
cctcaagaaaagaaggaaatccaaaaagaggcgagcaggagcagtaaagagcgtgagaaa
cacaggaaggctgacaggtgtcatgaagcagatgaggacttccccaggggccccaaactc
cattcttctcctggctctttcaaaacccagaaggctcccaagtccttccaccactcatca
cattcccataagccaagagaagacaagccgcccagagagggcaagcggaacaagcataag
aaaaaggagagctacttggaggctgatggcaatgataatttatttctcattaagcagagg
aagaaaaagtctaagctgtga
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