Lutra lutra (Eurasian river otter): 125083286
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Entry
125083286 CDS
T08100
Name
(RefSeq) spermatid perinuclear RNA-binding protein isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llv03041
]
125083286
Spliceosome [BR:
llv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125083286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
dsrm
SGP
Dicer_dsRBD
DUF6857
Motif
Other DBs
NCBI-GeneID:
125083286
NCBI-ProteinID:
XP_047555475
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All DBs
Position
13:complement(84066572..84213825)
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AA seq
672 aa
AA seq
DB search
MRSIRSFANDDRHVMVKHSTIYPSPEELEAVQNMVSTVECALKHVSDWLDETNKGTKPEG
ETEVKKDEAVDTYSKDQGGRTLCGVMRIGLVAKGLLIKDDMDLELVLMCKDKPTETLLNT
VKDNLPIQIQKLTEEKYQVEQCVDEASIIIRNTKEPTLTLKVILTSPLIRDELEKKDGEK
VAMKDPPDLLDRQKCLNALASLRHAKWFQARANGLKSCVIVLRILRDLCNRVPTWAPLKG
WPLELICEKSIGTCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCERDPTDALSYMTV
QQKEDITHSAQHALRLSAFGQIYKVLEMDPLPSSKPFQKYSWSVTDKEGAGSSALKRPFE
DGLGDDKDPNKKMKRNLRKILDSKAIDLMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTM
SVDVDGTTYEASGPSKKTAKLHVAVKVLQAMGYPTGFDADIECMSSDEKSDNEGKNETVS
SNSSNNTGNSTTETSSTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISETGGSHDKR
FVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAANNKKKKIIPQAKGVVNTAV
SAAVQAVRGRGRGTLTRGAFVGATAAPGYIAPGYGAPYGYSTAAPAYGLPKRMVLLPVMK
FPTYPVPHYSFF
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagatctattagatcttttgccaacgatgatcgccatgttatggtgaaacattcaaca
atctatccatctccggaggaacttgaagctgttcagaatatggtgtctactgttgaatgt
gctcttaaacatgtgtcagattggctcgatgaaacaaataaaggcacaaaaccagagggt
gagacagaagtgaagaaggatgaggccgtagacacctattccaaggatcaaggtggtcgg
acattgtgtggtgtaatgaggattggcctggttgcaaaaggcttgctgattaaagatgat
atggacttggagctggttttaatgtgcaaagacaaacccacagagaccctgttaaataca
gtcaaagataatcttcctattcagattcagaaactcacagaagagaaataccaagtggaa
caatgtgtagatgaggcttctattataattcggaatacaaaagagcccacgctaactttg
aaggtgatacttacttcccctctaattagggacgaattggagaagaaggatggagaaaag
gttgcgatgaaagatcctccggacttattggacaggcagaaatgcctgaacgccttggcg
tctcttcgacatgccaaatggtttcaggcaagggcaaacggattaaaatcatgtgtaatt
gtcctccgcattctgcgtgatttgtgcaacagagttcccacatgggcaccattaaaagga
tggccactagagcttatatgtgaaaagtctataggtacttgtaatagacctttgggcgct
ggggaggccttgagacgagtaatggagtgtttggcatctggaatactacttcctgggggt
cctggtctacatgatccttgtgagcgagacccaacagatgctctcagctatatgaccgtc
cagcaaaaggaagatattacccacagtgcacagcatgcactcagactatcagcctttggc
cagatttataaagtgctggagatggacccccttccatctagtaagccttttcagaaatat
tcctggtcagttactgataaagaaggtgctgggtcttcagctctgaagaggccatttgaa
gatggattaggggatgataaagatcccaataagaagatgaaacgaaacttacggaaaatt
ctggatagtaaagcaatagaccttatgaacgcactaatgagactaaatcagatcaggcct
gggcttcagtataagctcttgtctcaatctggccccgtccacgccccagtcttcacaatg
tctgtagatgtggatggtacaacatatgaagcctcaggaccatccaagaaaacagcaaaa
cttcatgtagcagtgaaggtgttacaagcaatgggatacccaacgggctttgacgcagat
attgaatgtatgagttccgatgaaaaatcagataatgaaggcaaaaatgaaacagtgtct
tcaaactcaagcaataatactggaaattctacaactgaaacctccagtaccttagaggtc
agaactcagggccctatcctcacagcaagtggcaaaaatcctgtcatggagctcaatgaa
aaaagaagaggtcttaagtatgaactcatctcggagacgggtggaagccatgacaaacgc
tttgtaatggaggtagaagtagatggacagaaattcagaggtgcaggtccaaataagaaa
gtggcaaaggcaagtgcagctttagctgccctggagaagctgttttctggacccaatgca
gcaaataataagaaaaagaagattatccctcaggcaaagggtgttgtgaatacagctgtg
tctgcagcagtccaagctgttcggggcagaggaagaggaacactaacaaggggagctttt
gttggggctacagctgctcctggctacatagctccaggctatggagcaccgtatggttac
agcacagctgcccctgcctatggtttacccaagagaatggttctgttgcccgttatgaaa
ttcccaacatatcctgttccccactactcattcttttag
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