Lutra lutra (Eurasian river otter): 125083300
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Entry
125083300 CDS
T08100
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125083300
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125083300
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125083300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
125083300
NCBI-ProteinID:
XP_047555522
LinkDB
All DBs
Position
13:complement(60000721..60133724)
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AA seq
619 aa
AA seq
DB search
MSGSAAAAVAAAAASAAAAAAHFQPQSSSPRPGAAELGPLRRPRPPPPPPRPEPAAAGRL
SPPGHGPLRASAQSGGACGRAPGAGSVGASFQCQSIHHDHICHDDSDKISPGANSAPLPG
HPNKVICERVRLQSLFPLLPSDQNTTVQEDAHFKAFFQSEDSPSPKRQRLSHSVFDYTSA
SPAPSPPMRPWEMTSNRQPPSVRSSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHN
SISQDENYHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTV
PVSYTVTTVAPHGIPLCTGQHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHL
PVPYAAFPPLISSDPFLLHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLG
EHLPVGGFTYPPSAHPPTLPPSAPLQFLTHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQ
QPIPPPPYHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPR
GLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA
NRTCPICRADASEVHRDSE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaagcgccgccgccgcggttgccgccgccgccgcctcagcagctgcggccgcc
gcgcacttccagcctcagtcgtcgtctcccaggccgggcgccgccgagctcgggcccctg
cgacgcccgcgccccccgccgccgccgccccggcccgagccagccgctgccggccgcctc
agccctccgggccacgggcctctccgggcgagcgcccagagtggcggcgcctgcggccga
gcgccgggagcaggtagtgttggtgcttcttttcagtgccagtccatccatcacgaccac
atttgtcatgatgacagtgacaagatatctcccggggccaattcagcacctctacctggc
catcctaacaaggtgatttgtgaaagggtgagacttcagagcctgttccctctcctccca
agtgatcagaatactaccgttcaagaggatgctcacttcaaagctttcttccagagtgaa
gatagtccgagtcccaagagacagcgcctctctcattcagtctttgattatacatcagca
tcaccagctccctcaccaccaatgcgaccatgggagatgacatcaaataggcagccccct
tcagttcgatcaagccaacatcacttctcaggggaacgatgcaacacacctgcacgcaac
agaagaagtcctcctgtcaggcgccagagaggaagaagggatcgtctgtctcgacataat
tccattagtcaagatgaaaactatcaccatctcccttatgcacagcagcaagcaatagag
gaacctcgagccttccaccctccgaatgtatctccccgtctgttacaccctgctgctcat
ccaccccagcaaaatgcagtaatggttgacatacatgatcagctccatcagggcactgtc
cctgtttcttacacagtaacaacagtggcaccacatggaatcccactctgcacaggccag
cacatccctgcttgcagtacacaacaggtcccaggatgctctgtggttttcagtggacag
cacctccctgtctgtagtgtgcctcctccaatgcttcaagcatgttcagttcagcactta
ccagtaccatatgccgcgttcccaccccttatttctagtgacccatttcttttacatcct
ccccacctttctccccatcatcctcctcatttgccaccacctggccagtttgtccctttc
caaacacagcagtcacgatcgcctctgcaaaggatagaaaatgaagtggaactcttaggt
gaacatcttccagtaggaggttttacttatcctccatcggcccatcccccaacattacct
ccatcagctcctttgcagttcctaacccatgatcctttgcatcaggaggtgtcctttgga
gtaccttatcctccatttatgcctcggaggctcacaggacgcagtagatatcgatcccag
cagccaataccacctcccccctatcatcccagcttactaccatatgtgttatcaatgctt
ccagtgccacctgcagtgggcccaactttcagctttgaattggacgtggaagatggagaa
gtagaaaattacgaggccctactaaacctggcagagcgactgggagaggctaagcctcga
ggactgactaaagcagatattgaacagcttccttcttaccggttcaatcctaacaatcac
cagtcagaacagactttgtgtgtagtatgcatgtgtgattttgagtcaaggcagctactt
agagttttaccctgtaaccacgagttccatgccaagtgtgtcgacaaatggcttaaggca
aatcgtacttgtccaatctgccgagctgatgcttcagaagtgcatcgggattcagaatga
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