Lutra lutra (Eurasian river otter): 125083303
Help
Entry
125083303 CDS
T08100
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04137
Mitophagy - animal
llv04141
Protein processing in endoplasmic reticulum
llv05014
Amyotrophic lateral sclerosis
llv05022
Pathways of neurodegeneration - multiple diseases
llv05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125083303
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125083303
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
125083303
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
125083303
05022 Pathways of neurodegeneration - multiple diseases
125083303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125083303
03009 Ribosome biogenesis [BR:
llv03009
]
125083303
04131 Membrane trafficking [BR:
llv04131
]
125083303
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
llv04147
]
125083303
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
125083303
Ribosome biogenesis [BR:
llv03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
125083303
Membrane trafficking [BR:
llv04131
]
SNARE
SNARE associated proteins
Others
125083303
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125083303
Exosome [BR:
llv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125083303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
DUF3944
Zot
Motif
Other DBs
NCBI-GeneID:
125083303
NCBI-ProteinID:
XP_047555538
LinkDB
All DBs
Position
13:complement(58769854..58784265)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGSGGGTGGSVYTEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctctggagctgattcaaaaggtgatgacttatcaacagccattcttaaacagaag
aaccgtcccaatcggttaattgttgatgaagccatcaatgaggacaacagtgtggtgtct
ttgtcccagcccaagatggatgagctgcagttgttccgaggtgacacagtgttgctgaaa
ggaaagaagaggagggaagctgtgtgcattgtgctttctgatgacacatgttccgatgag
aagattcgaatgaatagagttgttcggaacaaccttcgcgtacatctaggagatgtcatc
agcatccagccgtgccctgatgtgaagtacggcaaacgtatccatgtgctacccatcgat
gacacggtggaaggcatcactggcaatctcttcgaggtataccttaagccatacttcctg
gaagcttatcgacccatccggaaaggagacattttccttgtccggggtggaatgcgtgct
gtagagttcaaagtagtggagacagatcccagcccttactgcattgttgctccagacaca
gtgatccactgtgaaggggagcctatcaaacgagaggatgaggaagaatccttgaatgaa
gtaggctatgatgacattggtggctgcagaaaacagctggctcagataaaggagatggta
gagctacctctcagacatcctgccctctttaaggcaattggtgttaagcctcctcgggga
atcctgctgtatggacctcctgggactgggaagaccctaattgcccgagctgtggcaaat
gagactggagccttcttcttcttgatcaatggtcctgagatcatgagcaagttggctggt
gagtctgagagcaaccttcgtaaagcctttgaggaggctgagaagaatgctcctgctatc
atcttcattgatgaactagatgccatcgctcccaaaagagagaaaacccacggggaggtg
gaacggcgtattgtatcacagttattgaccctcatggatggtctaaagcagagagcacat
gtgattgtaatggcagcaacaaacagacccaatagcattgacccagcccttcgacgattt
ggtcgctttgacagggaggtagatattggaatccctgatgctacaggacgcttggaaatt
cttcagatccataccaagaacatgaagctcgcagacgatgtggacctggagcaggtcgcc
aatgagactcatgggcatgtgggtgctgacttagcagccctgtgctcagaagctgctctt
caagctatccgcaagaagatggacctcattgacttagaggatgagactatcgatgctgaa
gtcatgaactctctggcagttactatggatgacttccggtgggccctgagccagagcaat
ccatcagcactgagggaaactgtggtggaggtaccacaggtgacctgggaggacatcggg
ggcctggaggatgtcaaacgtgagcttcaggagctggtccagtatcctgtggagcatcca
gacaaattcctcaagtttggcatgacaccctccaagggagtactcttctatggacctcct
ggctgtgggaaaaccttgctggccaaagccattgctaatgagtgccaggccaacttcatc
tccatcaagggtcctgagctgctcaccatgtggtttggagagtctgaagccaatgtcagg
gaaatctttgacaaggcccgccaagctgccccctgtgtactcttctttgatgagctggat
tcaatcgccaaggcccgtggtggcaacattggagatggcggtggggctgcagaccgagtc
atcaaccagatcctgacagaaatggatggcatgtctacaaaaaagaatgtgtttattatt
ggcgctactaatcgacctgacattattgatcctgctatcctgcgacctggccgcctcgat
cagctcatctatattcctcttcctgatgagaagtcccgtgttgccatcctcaaggccaac
ctgcgcaagtctccagttgccaaggatgtggacttggagttcctggctaagatgactaat
ggcttctctggagctgacctgacagaaatttgccagcgtgcttgcaagctggccatccgt
gaatctatcgagagtgaaattaggcgagaacgggagaggcagaccaatccatctgccatg
gaggtagaagaagatgatccagtgcctgagatccgccgagatcactttgaggaagctatg
cgctttgcccgccgttctgtcagtgataatgacatccggaagtatgagatgtttgctcag
accctccagcagagtcggggctttggcagcttcagattcccttcaggaaaccagggtgga
gctggccccagtcagggcagtggaggcggcacaggtggcagtgtgtacacggaagacaat
gatgatgatctgtatggctaa
DBGET
integrated database retrieval system
