Lutra lutra (Eurasian river otter): 125083828
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Entry
125083828 CDS
T08100
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
125083828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
llv03000
]
125083828
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
llv03310
]
125083828
Transcription factors [BR:
llv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125083828
Nuclear receptors [BR:
llv03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
125083828
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
125083828
NCBI-ProteinID:
XP_047556726
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Position
13:15865465..16053832
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AA seq
459 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYGGGLSNGLGSLSGEAGGAYANGHVIDLPKSEGYYSVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgataagtcctccgggatc
cactacggagtgatcacgtgtgaaggctgcaagggattctttaggaggagccaacaaaac
aatgcctcttactcctgcccacggcagagaaactgtttaatcgacagaaccaacagaaac
cgttgccagcactgccgactgcaaaagtgtcttgccctaggaatgtcgagagatgctgtg
aagttcggcaggatgtccaagaagcagcgggacagcctgtatgcggaggtgcagaagcac
cagcagcggctgcaggagcagcggcagcagcagagcggggaggccgaggcgctggccagg
gtatacggcggcggcctcagcaacggcctcggcagcctgagcggcgaggcggggggcgct
tacgccaatggacacgtcatcgacctgcccaagtccgagggttactacagcgtggattcc
ggccagccgtccccggatcaatctggacttgacatgactggaatcaaacagataaagcaa
gaacccatctatgacctcacgtctgtacccaacttgtttacctatagctctttcaacaac
gggcagctagcgccagggatcacgatgaccgaaatcgatcgaattgcacagaacatcatc
aagtcccatctggagacgtgtcagtacaccatggaggagctacaccagctggcgtggcag
acccacacctatgaagaaattaaagcctatcagagcaagtccagggaagcgctgtggcaa
cagtgcgccatccagatcactcacgccatccagtacgtggtggagttcgcgaagcggatc
acgggcttcatggagctctgtcagaacgaccagattctacttctcaagtcaggttgcttg
gaagtggttttagtgagaatgtgccgtgccttcaacccattaaacaacactgttctgttt
gaaggaaaatatggaggaatgcagatgttcaaggccttaggttccgatgacctagtgaat
gaagcatttgactttgcaaagaatttgtgttccttgcagctgactgaggaggagattgct
ttgttctcatctgctgttctgatatctccagaccgagcctggctgatagaaccaaggaag
gtccagaagcttcaggaaaaaatttattttgcacttcaacacgtgattcagaagaatcac
ctggatgatgagactttggcaaagttaatagctaagatccccaccatcacggcggtctgc
aacttgcacggggagaagttgcaggtattcaaacaatcacatccagacatagtgaacacc
ctctttcctccattatacaaggagctctttaatcctgactgtgccaccgtctgcaaatga
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