Lutra lutra (Eurasian river otter): 125084012
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Entry
125084012 CDS
T08100
Name
(RefSeq) protein shortage in chiasmata 1 ortholog-like isoform X1
KO
K28108
shortage in chiasmata 1
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125084012
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Meiosis-specific proteins
Others
125084012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
125084012
NCBI-ProteinID:
XP_047557040
LinkDB
All DBs
Position
13:complement(73978831..74057959)
Genome browser
AA seq
1507 aa
AA seq
DB search
MFSTFKYCAIDYLYENIVRKKFCRDALLLRVPSCLYQDGNYYAGVIDNKFRRPWMRVSAV
SVWGMTDDISVLDQWKASLFVEDFLEKKTITGMVTQIDCDFEEVVPSSNPNSQTEVEEAS
LYTHKDYTEVFTLVSGLEKCPALQTQNEDLFIDEEIIFLNNLTTYKSQLPTLHTLLSRLK
LFLVKDPILDFKGQIFTEANFFRECSSFQEDLKGLVKEDFYMDKENFCQEKLEDTPSTLP
ECEFLIPTSLKQEVDSLSLSELKESLNLVPEIINYADENEKLFKIDLTAKHGIDIEDIKC
SSTEILAIQNHCEPEYSEPVELEMPLTHLRLTNQHSPMTSLCTGLQTFPFSPICKISLLT
AEESANKNHMMWQLESCRSSLKPFLLTVPRTKEPNSQYSIMDLKKIFSIEEESLVVNLVS
TEWWEKGQVNLKEAEILEHPNMYLCHDNLSSDDTKMEIFLPTKVPQLESWLEQKSCSSSI
VLINETSTNDHLLLPQKISSLAEVSDLCFSDDNLSVKQPTKEEKPKNDLELVDRISQNKE
NEDYLELDCTVPSTEPSSSPKIDKASFKHGKKSENDLDLLSDFITLRNKYKTCMSKTEVT
GSKENDGFQDKEHSLTLQEESPPVCTNKALEKINQERIVDNVIEIQASDSQCQAFCLLEA
AATPILKKLACLCILPAANWTFATVIFDQTRFLLKEQEKVISDAIQQGTNDEKEVTFKHA
ALLHLLVTIRDVLLTCSLDTALGYLSNAKDIYKSILGSYLDDICRQLEIVQFIRETKPET
NHKIQELQCQILNWMQSGQQIKVLIIIRMDSDGEKHLLIKILNKMEGLTLTVLHSNNKRK
DFLESEGVLNGKSSCVVVHNQYIGSDFPWSNFSFVVEYNFVENSCWTKHCKKLNIPHKVF
KVILPDTVLQRSTLLDSFGGFLLEIQIPYVFFASEGLLNTQEILQLLESKYNITLVERCC
SESLKLFGGTECYVVVTVDEHTAIILQDLEELNCEKASDNIIMRLMALSFQYSYCWIILY
TKKTLNSEYHLTEKTLHHLALIYAALVSFGLKSEELDVKLIIAPGVEEAALIIRQIADHN
LMTSKRDPREWLDKSWLEVSPSKEEMYLLDFPCINPLVAQLMLNKGRSLHWVLLATLCQL
QELLPEVPEKVLKHFCSITSLFKISSSSITNSPQSPSPQENGNQTSTFTSQSSASGPSNS
VFQGHNENYHFSDIGEAVHGDTNSSSNYNSSLMELREMPCVLPPVTSYNQASCWKDSSCN
PNIVHNPFLINTESRNVAGDSFQNQNDSESDVFCLDLTQINYENIVSPIDTQKRVAPNFI
NYQKKGTHDAKGHINKEVSAPSFSLEGSQSPLPWNFKKDVWEQKNHSFNLKYGAKQTACD
KWYSQEDNLFTNQQKCLSDELEDFICERSNAGTKRTSWKELPSAPSLDLFCASDPNVNQQ
EFNSLYFQQRAGKCLGQKRHSDSSSNSGDKKSLPDFMCSQLPQFKKRRLVYEKVPGRADG
QTRLRFF
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaacattcaaatattgtgcaatagactatttatatgagaatatagttagaaag
aagttttgcagagatgctttattgcttcgagtcccttcatgtttatatcaagatggaaat
tattatgcaggagttattgataataagtttaggaggccatggatgagagtttcagctgtt
tcggtgtggggaatgacagatgatatttcagtcttggatcaatggaaagcaagtctcttt
gtggaagatttcctagagaaaaaaacaattacagggatggtgactcagattgactgtgac
tttgaggaagttgttccaagttcaaacccaaactcccaaactgaagtagaggaagccagt
ttatatacccataaggactacactgaagtctttacacttgtcagcggtttagaaaaatgt
ccagcacttcaaacacagaatgaagatttgtttattgatgaagaaataatttttttaaat
aacttgacgacctataaaagtcagctaccaactttgcatactttgttgagtaggctaaaa
ctatttttggtaaaggaccccattttagatttcaaaggacagatcttcacagaagctaat
ttcttcagggaatgttcctcttttcaagaagatttgaaaggtctagtgaaagaagatttt
tacatggataaagagaacttttgtcaggaaaagctagaagatacaccatcaactttgcct
gagtgtgaattcttaatacctacaagcctcaaacaagaagttgatagtctatcactctcc
gaactgaaggaatccttaaacttagtgccagaaataataaattatgcagatgaaaatgaa
aagcttttcaaaatagatcttactgctaagcatggaattgacattgaggatataaaatgc
agctccacagagattttggccattcaaaaccattgtgaaccagagtacagtgaaccagta
gagttagaaatgccattaactcatctacgtctaacaaaccaacattctcccatgacttca
ttatgtacaggacttcagacatttccattttctcctatttgtaaaattagtttgcttact
gctgaagaatcagctaacaaaaaccatatgatgtggcagttagaaagctgcagaagctca
ctgaaaccgtttctgcttacagtgccaagaactaaagagcccaacagtcaatattcaatt
atggatttgaaaaagatattttctattgaggaagaaagccttgtagttaatcttgtgagc
acagagtggtgggaaaagggacaagtgaatctgaaagaggcagaaattttggaacatcca
aatatgtatttgtgtcatgataacctatcatctgatgatactaaaatggagatatttttg
ccaacaaaagtgcctcagttagaatcatggctagagcaaaaaagttgttcttcatctatt
gtacttattaatgagacatctacaaatgatcatttattacttccacaaaagatttcatct
ctggcagaagtatcagacctgtgtttttctgatgacaatttatctgttaaacaaccaaca
aaagaagaaaaaccaaagaatgatctagaactagttgatagaataagccaaaataaagaa
aatgaagattacttagaacttgactgcacagtaccatctactgaaccatcttcctctcca
aaaattgataaagcatcttttaaacatggtaaaaaatcggagaatgatttggaccttttg
agtgactttattacactgcgaaataaatataagacttgtatgtcaaagactgaagtcaca
ggcagtaaagaaaatgatggatttcaagataaagaacattctttgactcttcaggaagaa
agtcctcctgtttgtactaataaagctctagagaaaataaatcaggaaaggatagtggat
aatgtcattgaaattcaagcatcagatagccagtgccaagcattctgtctcctagaagca
gcagctactcctattttaaaaaaacttgcatgcctctgtattctccctgctgctaattgg
acatttgccactgtcatttttgaccaaacaagattcctcctaaaggaacaagaaaaagta
ataagtgatgctattcagcaaggtacaaatgatgaaaaagaagtgacgttcaagcatgct
gctctcttacatcttctggtaacaattagagatgtccttttaacatgtagcttggacaca
gcattgggatatttgtcaaatgcaaaagatatctacaaaagcattttaggctcctattta
gatgacatttgcagacagctggagattgtacagtttattagggaaacaaagcctgaaacc
aaccacaagatacaagaactacaatgtcagatactaaattggatgcaaagtggacaacag
attaaggtgctgattataataagaatggactcagatggtgaaaaacatttactcattaaa
atccttaacaaaatggaaggtttaacattgactgtcttacattcaaacaacaaaaggaaa
gattttctggaatctgaaggtgttttaaatggtaaaagttcctgtgtagttgtgcataat
caatatattggatcagatttcccctggagtaacttctcatttgtggtggaatataatttt
gtagaaaactcctgttggactaaacactgcaagaaattgaatattcctcacaaggtcttc
aaagtgattcttccagacacagttttacagagaagcaccttgctggatagttttggtgga
tttcttttggaaattcagattccatatgtgttttttgcatctgaaggacttcttaatact
caagaaatacttcagttgctagaatccaagtataatatcacactagtggagagatgctgc
agtgagtcattgaaactctttggaggtacagagtgttatgtagtggtgacagttgatgaa
cacactgccataattttgcaggacctagaagaattgaactgtgagaaggcatcagacaat
atcattatgagactgatggcattatcattccagtacagctattgttggataatcttgtat
accaaaaaaacattaaactcagaataccatcttacagaaaaaacacttcatcatctagca
ctgatttatgcagctttggtatcatttggtctaaaatcagaagaactggatgtaaagctt
ataattgccccaggagtggaagaggctgcactgataattcggcaaattgctgatcacaat
ttaatgacctcgaagagagatcctcgtgaatggttggataaatcctggcttgaagtttca
ccatctaaggaagaaatgtacttacttgattttccatgtattaacccattggtggctcag
ctcatgttaaataaaggacgttcactgcactgggtattattagcaactctgtgtcaactt
caggagcttttacctgaagttccagaaaaagtgttaaagcatttttgtagcatcacttcc
ttattcaagattagttcttcttccataacaaactcacctcaaagtccatcacctcaggaa
aatggaaatcagactagtaccttcacctcccagagttcagcttctggcccttcaaactct
gtctttcaaggacataatgaaaattaccacttttcagatataggagaggcagtgcatgga
gacacaaacagctcttcaaactataactcttcccttatggaactaagagaaatgccatgc
gttttaccacctgtgacttcttacaatcaggccagctgctggaaagactccagttgtaac
ccaaacatagtgcataatcctttcctgattaatacagaatcaaggaatgtagctggtgac
tcctttcaaaaccaaaatgattcagagtcagatgtcttttgtttggatctaacacaaata
aactatgaaaacatagtatcaccaattgacactcagaagagagttgcccctaattttata
aattaccagaaaaagggaacacatgatgcaaaaggacatataaataaagaagtgtctgcc
cctagcttttcactagaaggctcccaatctcctcttccctggaactttaagaaagatgta
tgggaacaaaagaatcactcattcaacttaaaatatggtgcaaagcagactgcatgtgac
aaatggtactctcaggaagataatttattcactaatcagcaaaaatgcctatctgatgag
ttagaagacttcatatgtgaaaggtcaaatgctgggactaaaaggacttcctggaaagaa
ttaccgtctgcccccagtttggatttattttgtgcttctgatcctaatgtaaatcaacaa
gaattcaacagtctttatttccaacaaagagctggaaaatgtttaggacagaagaggcat
tctgactcctcatctaactcaggagacaagaaatcattaccagatttcatgtgctcacaa
ctaccacaattcaaaaaacggcgtctggtgtatgaaaaagtccctggtagagctgatgga
caaactcgtctgaggtttttttga
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