Lutra lutra (Eurasian river otter): 125084102
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Entry
125084102 CDS
T08100
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04210
Apoptosis
llv04517
IgSF CAM signaling
llv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125084102
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125084102
09142 Cell motility
04820 Cytoskeleton in muscle cells
125084102
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
llv04812
]
125084102
Cytoskeleton proteins [BR:
llv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125084102
Intermediate filaments
Intermediate filament-binding proteins
125084102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
EF-hand_6
SH3_9
EF-hand_8
SH3_2
EF-hand_5
SH3_3
EF-hand_FSTL1
SH3_10
SCO1-SenC
Tetrabrachion
Spectrin_3
Motif
Other DBs
NCBI-GeneID:
125084102
NCBI-ProteinID:
XP_047557234
LinkDB
All DBs
Position
13:88648880..88710387
Genome browser
AA seq
2511 aa
AA seq
DB search
MLSSFRKRRVQKMDPSGVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQF
FQRDAEELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNL
MISEGHFASETIRTRLMELHRQWELLLEKMREKGVKLLQAQKLVQYLRECEDVMDWINDK
EAIVTSEELGQDLEHVEVLQKKFEEFQTDMAAHEERVNEVNQFAAKLIQEQHPEEETIKT
KQDEVNAAWQRLKGLALQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLA
SVQALLRKHEGLERDLAALEDKVKALCAEADRLQQSHPLSAAQIQVKREELIANWEQIRT
LAAERHARLNDSYRLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKG
EIDAHEDSFKSADESGQALLAAGHYASDEVREKLSVLAEERAALLELWELRRQQYEQCMD
LQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDE
FATKLIQNNHYAMDDVATRRDALLSRRNALHERAMCRRAQLADSFHLQQFFRDSDELKSW
VNEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLIDVNHYAKDE
VAARMNEVISLWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGK
DLTNVQNLQKKHALLEADVAAHQDRIDGITIQARQFQDAGHFDAENIKKKQEALVARYEA
LKEPMIARKQKLADSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQA
LQAEIAGHEPRIKAVTQKGDAMVEEGHFAAEDVKAKLSELNQKWESLKSKASQRRQDLED
SLQAQQYFADANEAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQA
LRDQAQSCRQQVAPMDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVE
VNDRQGFVPAAYVKKLDPAQSASRENLLEEQGSIAARQEQIDHQTRVTKEAGSVSLRMKQ
VEELYHSLLELGEKRKAMLEKSCKRFMLFREANELQQWINEKEAALTSEEVGADLEQVEV
LQKKFDDFQKDLKANESRLKDINKVAEDLESEGLMAEEVQAVQQQEVCGMMPRQDETDSK
TASPWKSARLMVHTVATFNSIKELNERWRSLQQLAEERSQLLGSAHEVQRFHRDADETKE
WIEEKNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPESA
EDLQEKCTELDQAWSSLGKRADQRKAKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDEL
ARDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEVKEKLDILDRER
AGLEKAWAQRRMMLDQCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKH
EDFDKAINVQEEKIAALQSFAEQLVAAGHYAKGDICSRRNEVLDRWRRLKAQMIEKRSKL
GESQTLQQFSRDVDEIEAWISEKLQTASDESYKDPTNIQLSKLLSKHQKHQAFEAELHAN
ADRIRGVIDTGNSLIERGACAGSEDAVKARLAALADQWQFLVQKSAEKSQKLKEANKQQN
FNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQAD
SLMTSSAFDTSQVKDKRDTINGRFQKIKSMAASRRAKLNESHRLHQFFRDMDDEESWIKE
KKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQ
QRLSQFVEHWNELKQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTL
AAIQGLLKKHEAFETDFTVHKDRVNDVCSNGQDLIKKNNHHEENISSKMKGLNGKVSDLE
KAAAQRKAKLEENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFD
AGLQAFQQEGIANITALKDQLLAAKHIQSKAIEARHAALMKRWSQLLANSATRKKKLLEA
QSHFRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALREAHDAFRSSLSS
AQADFSQLAELDRQIKSFRVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEE
NDKLRQEFAQHANAFHQWIQETRTYLLDGIAYRRVIRVYQYEVGDDLSGRSCMVEESGTL
ESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLG
MRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKDKSGRLNHQEFKSCLRSLGYDLPM
VEEGEPDPEFEAILDTVDPNRDGHVSLQEYMAFMISRETENVKSSEEIESAFRALSSEGK
PYVTKEELYQNLTREQADYCVSHMKPYVDGKGRELPTAFDYVEFTRSLFVN
NT seq
7536 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcatcgtttcgtaaacgcagagtccagaaaatggacccaagtggggtcaaagtg
ctggaaacagcagaggacatccaggagaggcggcagcaggtcctagacagataccaccgc
ttcaaggagctctcaaccctccggcgccagaagctcgaagactcctatcgattccagttt
ttccagagagatgctgaggagctggagaaatggattcaggagaaactacaaatcgcatcc
gatgagaattacaaagacccaaccaacttgcagggcaagcttcagaagcaccaggccttt
gaagctgaagtccaggccaactcaggagccattgttaaactggatgaaactggtaacctg
atgatctcagaagggcactttgcatctgaaaccataaggactcgtttgatggagctgcac
cgccagtgggagctgcttttggagaagatgcgggagaagggagtcaaactgctgcaggcc
cagaagctcgtgcagtatttgcgcgagtgtgaggacgtgatggactggatcaatgacaag
gaagcgatcgtgacctctgaggagctgggccaggacctggagcacgtggaggttttacag
aagaaatttgaagagtttcaaacagatatggccgcccatgaagaaagagttaatgaggtg
aaccagtttgccgccaagctcattcaggagcagcaccccgaggaggaaaccatcaagacc
aagcaggacgaagtgaacgcggcctggcagcggctgaagggactggccctgcagagacag
gggaagctcttcggggcggctgaggttcagcgatttaacagggatgtggatgagacgatc
agctggattaaggaaaaggagcagctaatggcctctgatgattttggccgcgacctggca
agcgttcaggctctgctgcggaagcacgagggtttggagagagatcttgctgctttggag
gacaaggtcaaagccctgtgtgccgaggccgaccgcctacagcagtcccaccctctgagc
gccgcgcagattcaagtgaagcgagaggagctgattgccaactgggagcagatccggact
ctggccgcggagagacacgcccgcctcaacgactcctacaggcttcagcgattccttgct
gacttccgagacctcaccagctgggtgactgagatgaaagccctcatcaatgcagatgag
ctcgccaatgacgtggccggggcggaagccctgctggacaggcatcaggagcataagggt
gagatcgacgctcacgaggacagctttaaatctgcagatgagtccggacaggccctgctg
gccgctgggcattatgcctcggacgaagtgagagagaagctgagcgtcttggccgaggag
cgggccgcgctgctggagctgtgggagctgcggcgacagcagtacgagcagtgcatggac
ctgcagctcttctaccgcgacaccgagcaggtggacaactggatgagcaagcaggaggcc
ttcctgctgaacgaagacttgggggactccttggacagtgtggaggcgctccttaagaaa
cacgaggacttcgagaagtccctcagcgcccaggaggaaaagatcacagctctggatgag
tttgcaaccaagctgattcagaataaccactacgccatggacgatgtggccacccgccga
gatgcgctgctgagccgccgcaacgcccttcacgagagagccatgtgtcgccgggcccag
ctggcggactctttccacctgcagcagtttttccgagactcggatgagctcaagagctgg
gtcaacgagaagatgaaaactgccacagatgaagcttataaagacccatccaacctacaa
ggaaaagtacagaagcatcaggcttttgaggccgagctctcggccaaccagagccgcatt
gacgccctggagaaagcggggcaaaagctcattgatgtcaaccactatgccaaggatgag
gtagcggctcggatgaatgaggtcatcagtttgtggaagaagttgctggaagccactgaa
ctgaaagggataaagctccgcgaggcgaaccagcagcagcagttcaaccgcaacgtcgag
gatatcgagctgtggctgtatgaagtggagggtcacctggcttcagacgattacggcaaa
gatcttaccaacgtccagaacctccagaagaagcacgccctgctagaggctgacgtggcc
gctcaccaggatcgaattgatggcatcaccattcaggcccgccagttccaggatgctggc
cattttgacgccgaaaacatcaagaagaagcaggaagccctcgtcgctcgctatgaggcg
ctcaaggaacccatgatcgcccgaaagcagaagctggctgactcgctgcgtttgcagcag
ctcttccgtgatgtggaggacgaggagacgtggattcgggagaaagagcccatcgccgca
tccaccaacagaggcaaagatttgattggcgtccagaatctgctgaagaagcaccaggcc
ctccaagcagaaattgctggccacgagccccgcatcaaagccgtcacgcagaagggggac
gccatggtggaggaaggccactttgctgctgaggacgtgaaggccaagctcagtgaactg
aaccagaagtgggagtccctcaagtccaaggcctcccagcggcggcaggacctggaagac
tccctgcaggcccagcagtacttcgccgatgccaacgaggccgagtcttggatgcgggag
aaggagcccatcgtgggcagcaccgactacgggaaggacgaggactccgcggaggctcta
ctgaagaaacacgaagctctgatgtcagatctcagcgcctacggcagcagcatccaggct
ctgcgggaccaggctcagtcatgccggcaacaagtggcccccatggatgacgagactggg
aaggagctggtcttggctctctacgactatcaggagaagagccctcgagaggtcaccatg
aagaaaggggatattctcaccttgctcaatagcaccaacaaggactggtggaaggtggaa
gtgaacgaccggcagggcttcgtgccggcggcgtacgtgaagaagctagaccccgcgcag
tcggcctcccgcgagaacctcctggaggaacagggcagcatagccgcgcggcaagaacag
attgaccaccagacgcgcgtaactaaggaggccggcagcgtgtctctgcgtatgaaacag
gtggaggaactgtaccactctctgctggagctgggcgagaagcgcaaggccatgctggag
aagagctgcaagcgcttcatgctgttccgggaggcgaacgagctgcagcagtggatcaac
gagaaggaggcggccctgaccagtgaggaggtcggcgccgacctggagcaggtcgaggtg
ctgcagaagaagttcgatgacttccagaaggatctgaaggccaatgagtcgcggctgaag
gacatcaacaaggtggctgaagacctggagtccgaaggtctgatggccgaggaggtgcag
gccgtccagcagcaggaggtgtgtggcatgatgcccaggcaggatgaaacggattccaag
accgcatccccgtggaagtctgctcgtctgatggttcacaccgtggccacctttaattcc
atcaaggagctgaacgagcgctggcggtccctgcagcagctggccgaggagcggagccag
ctcttgggcagtgcccacgaggtgcagaggttccacagagatgcggacgaaaccaaagag
tggattgaagagaagaatcaggctctaaacaccgacaactacggccacgatctggccagt
gtccaagccttgcagcgcaagcatgagggctttgagcgggacctcgcagctctcggcgac
aaggtcaactccttgggggagacagccgagcgcctgatccagtcccaccccgagtcggcc
gaggacctgcaggaaaagtgcacggagctggaccaggcgtggagcagcctggggaagcgc
gcggaccagcgcaaggccaagctgggcgactcccacgacctgcagcgcttcctcagtgac
ttccgggacctcatgtcttggatcaatggaatacgagggttggtgtcatcagacgagctc
gccagggacgtcaccggagctgaagctttgctggaacggcaccaggagcaccggacagaa
atcgatgccagggctggcactttccaggcctttgagcagtttgggcagcagctgctggct
catgggcactacgccagcccagaggtcaaggagaaactagatattctagatcgggagcgt
gcggggctggagaaggcctgggctcagcgcaggatgatgttggatcagtgcctcgagctg
cagctctttcatcgggactgcgagcaagctgagaactggatggctgcccgcgaggccttc
ttgaataccgaggacaaaggagactcgctggacagcgtggaggctctgatcaaaaaacat
gaggacttcgacaaagccatcaacgtccaagaggagaagatcgccgccctgcagtccttc
gctgagcagctcgtcgctgctggccactatgccaagggtgacatctgcagccgacgcaac
gaggttttggacaggtggcgccgcctgaaagcccagatgattgagaagaggtcgaagctg
ggagaatcgcagaccctccagcagttcagccgggacgtggatgagatcgaggcctggatc
agtgagaaactacagaccgcaagcgatgagtcctacaaggaccccaccaacatccagctt
tccaagctgctgagcaagcaccagaagcaccaggccttcgaagcagaactacatgccaac
gccgaccgcatccgcggggtcatcgacacgggcaactccctcatcgagcgcggggcctgt
gcgggcagtgaggatgctgtcaaggcccgactggctgccttagctgaccagtggcagttc
ctggtgcagaagtcagcagagaagagccagaagctgaaagaagccaacaaacagcagaac
ttcaacaccggcatcaaggacttcgacttctggctctctgaggtggaggccctgctggca
tctgaggattacggcaaagacctggcttccgtgaacaacttgctgaagaaacaccagctg
ctggaggcggatatatctgcccatgaggatcgcctgaaggacctgaacagccaagcagac
agcctgatgaccagcagtgcctttgacacctcccaagtgaaggacaagcgggacaccatt
aacggtcgtttccagaagatcaagagcatggcagcctcgcggcgagccaagctgaatgag
tcacatcgcctgcaccagttcttccgggacatggatgacgaggagtcctggatcaaggag
aagaagctgctggtgagctctgaggactacggccgagacctaacgggcgtgcagaacctg
aggaagaagcacaagcggctggaggcagaactggcggcccacgagcccgcgattcagggt
gtcctggacactgggaagaagctgtctgatgacaacaccattggcaaggaggagatccag
cagcgtctgagccagttcgtggagcactggaacgagctgaagcagctggcggctgcgcgg
ggccagcggctggaggagtccttggagtatcagcagtttgtggccaacgtggaagaggaa
gaagcgtggatcaacgagaagatgaccctggtagccagcgaggactacggagacacgctt
gctgctatccagggcttgttgaagaaacacgaagcttttgagacagacttcacggtgcac
aaggaccgtgtgaatgacgtctgcagcaacggacaggacctcatcaagaagaacaatcac
cacgaggagaacatctcttcaaagatgaagggcttgaatgggaaggtgtcagacttggag
aaagctgccgcccagaggaaggccaagcttgaggagaactcggccttccttcagttcaac
tggaaggcagacgtggtagagtcctggatcggtgaaaaggagaacagcctgaagacagat
gattatggccgagacctgtcttccgttcagactctcctcaccaaacaggaaacgtttgac
gctggcctgcaggccttccagcaggagggtatcgccaacatcaccgcgctcaaagaccag
ctgctggctgccaaacacattcagtcaaaggccatcgaggcccggcacgctgccctcatg
aagcgatggagccagcttctggccaactcggccacccggaagaagaagttgctggaggca
cagagtcacttccgcaaggtggaagacctcttcctgacgttcgccaaaaaggcctctgcc
ttcaacagctggtttgaaaatgccgaagaggatctgaccgatcccgtgcgttgcaactcc
ctggaggagatcagagctttgcgcgaggcccacgacgccttccgctcgtccctcagctct
gcccaggccgacttcagccagctggccgagctggaccgccagatcaagagcttccgtgtg
gcctccaacccctacacctggttcaccatggaggccctagaggagacgtggaggaacctg
cagaagatcatcaaggaacgggagctggaactgcagaaggagcagcgccggcaggaggag
aatgacaagctgcgccaggagttcgcccagcacgccaacgcgttccaccagtggatccag
gagaccagaacgtatctcctcgatggcatagcgtatcgtcgggtcattcgtgtctatcag
tatgaagttggggatgatctgtctggaaggtcctgcatggtggaagaatctgggactctg
gaatcccagctcgaagctaccaaacgcaagcaccaggagattcgagccatgaggagtcag
ctcaagaagattgaggacctcggggcagccatggaggaggccctgatcctggacaacaag
tacacggagcacagcaccgtgggcctggcccagcagtgggaccaacttgaccagctgggc
atgcgcatgcagcacaacctggagcagcagatccaggccaggaacacaaccggagtgacc
gaggaggccctcaaagaattcagcatgatgtttaaacacttcgacaaggacaagtcgggc
aggctgaaccaccaggagttcaagtcctgcctgcgctccctgggttatgacctgcccatg
gtggaggaaggggagcctgaccccgagttcgaggcaatcctagacaccgtggatccaaac
agggacggccacgtctccctgcaagagtacatggccttcatgatcagccgtgaaaccgag
aatgtcaaatccagcgaggagatcgagagcgccttccgggccctgagctccgaggggaag
ccctatgtgaccaaggaggagctgtaccagaacctgactcgggaacaagccgactactgc
gtctcccacatgaagccctacgtggacggcaagggccgcgaactccccaccgccttcgac
tacgtggagtttacccgctcgctcttcgtgaactga
DBGET
integrated database retrieval system
