Lutra lutra (Eurasian river otter): 125084438
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Entry
125084438 CDS
T08100
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125084438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
llv04990
]
125084438
Domain-containing proteins not elsewhere classified [BR:
llv04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125084438
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
PDZ_2
DUF3854
Motif
Other DBs
NCBI-GeneID:
125084438
NCBI-ProteinID:
XP_047557635
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All DBs
Position
14:46248934..46308852
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AA seq
707 aa
AA seq
DB search
MSYSVTLTGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTM
THLEAQNKIKSASYNLSLTLQKSKRPIPISTTAPPVQSPLPVIPHQKDPARDMNGSPAAL
NPNPEARASLGTPGTPELRHTFSSFSQTSVFSSHTEASEPGPPRGSPGAKTSLEGALDSL
SPKALQGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRGKASGAGLPGGSLPIKDLAVDS
ASPVYQAVIKNQNKPEDEAEEWARRSSNLQSRSFRILAQMTGTEYMQDPDEEALRRSSTP
IAHAPVCTSQAATPLLPASAQPPAAAPPGAASPPLSAATAHAATASATAPASSPADSPRP
QASAYSPAKATSPAPATHTYNEASAAPAPKPRVVTTASIRPSVYQPVPVSTYSPSPGANY
SPAPYTPSPAPTYSPSPAPSYTPSPAPSYNPAPSAAYSGGPVESASRPPWVSDDSFSQKF
APGKSTTSISKQTLPRGTPAYTPAGPQVSPLARGIVQRAERFPASSRTPLCGHCNNVIRG
PFLVAMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPICAKCNTKIMGE
VMHALKQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYVNLFSTKCHGCDFPVEAGD
KFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDRPLCKKHAHAINV
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacagcgtgaccctgaccgggcccgggccctggggcttccgtctccagggaggc
aaggacttcaacatgcctctcactatctcccggatcacaccggggagcaaggccgcccag
tcccagctcagccagggtgacctcgtggtggccatcgatggagtcaacacagacaccatg
acccacctggaagctcagaacaagatcaagtctgctagctacaacctgagtctcacgctg
cagaagtcaaaacgccccatccccatctccacaacagcacccccggtccagtcccctctg
ccggtgatcccccaccagaaggaccccgctcgggacatgaacggcagcccagcggcactc
aaccccaaccctgaggcgagggcgagtctgggcaccccgggcaccccggagctcaggcac
acctttagctccttctcccagacctccgtcttctcctcacacacggaggcctctgagccc
ggccctccgcggggcagcccaggggccaagaccagcctggagggagccctggactcactc
agcccgaaagccctgcagggctcaagccagccaaggcagtataacaaccccattggcctg
tactcagcagagaccctgagggagatggctcagatgtatcagatgagcctccgagggaag
gcctcaggtgctggactcccaggagggagccttcctattaaagaccttgccgtggacagc
gcctcccccgtgtaccaggccgtgattaagaaccagaacaagccagaagacgaggctgag
gagtgggcccggcgctcctccaacctgcagtctcgctctttccgcatcttggcccagatg
accgggacagaatacatgcaagaccctgatgaagaagctttacgacggtcaagcacccct
attgcgcatgctccagtgtgtaccagccaggccgccaccccgctgctgcccgcttccgcc
cagccgcctgctgctgcccctcccggggccgcctcgccacccctgagtgcagccactgcc
catgctgccaccgcctctgccacagcccctgcctcaagccctgcggacagtccaaggccc
caggcctctgcctacagtcccgccaaggcgacctctccagcacctgccactcatacatac
aatgaggcttcagctgcccctgcgcccaagccccgggttgtcaccaccgccagcatccgg
ccttctgtctaccagccagtgccggtgtccacgtacagcccatccccaggggccaattat
agtccagctccctacaccccctcgcctgcccccacctactccccttccccggctccaagc
tacaccccctcaccagccccaagctataaccctgccccctcagcggcctacagcgggggc
cctgtggagtctgccagccgtcccccatgggtgtcagatgacagcttctctcagaagttt
gcccctggcaagagtaccacctccatcagcaagcaaaccctgccccgagggacccctgcc
tacacccctgcggggccccaagtgtctcccctggccaggggcatcgttcagcgggctgag
cgtttcccagccagcagccggactccgctctgtggccactgtaataacgtcatcaggggc
ccctttctggtagccatgggccgttcctggcacccagaagagttcaactgtgcctactgc
aagacctccctggcggacgtgtgcttcgtagaggaacagaacaatgtgtactgcgagcgc
tgttacgagcagttctttgccccaatctgtgccaagtgcaacaccaaaatcatgggggaa
gtgatgcatgcgctgaaacagacatggcataccacctgtttcgtctgcgcagcttgcaaa
aaacccttcgggaacagcctcttccacatggaagacggggagccctactgtgagaaagac
tatgtcaatctgttcagcaccaagtgtcatggctgtgatttccccgtggaggccggtgac
aagtttattgaagccctgggacacacctggcatgacacctgcttcatctgcgcagtctgc
cacgtgaatctggaggggcagcctttctactccaagaaggacagacccctgtgcaagaag
cacgcacacgccatcaacgtgtag
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