Lutra lutra (Eurasian river otter): 125084627
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Entry
125084627 CDS
T08100
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03082
ATP-dependent chromatin remodeling
llv04714
Thermogenesis
llv05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125084627
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
125084627
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
125084627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125084627
03036 Chromosome and associated proteins [BR:
llv03036
]
125084627
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125084627
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
125084627
Chromatin remodeling factors
BAF complex
125084627
PBAF complex
125084627
GBAF(ncBAF) complex
125084627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
125084627
NCBI-ProteinID:
XP_047558124
LinkDB
All DBs
Position
1:complement(215457991..215550665)
Genome browser
AA seq
1650 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGAHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPALPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQPAQPPNLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATSHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKTLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDES
KKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEY
YELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVF
TSVRQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGGRRRPS
RGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccggatccacccctgggtggaactcctcggccaggcccttccccgggcccg
ggcccctcccctggagccatgttgggccctagcccaggtccctcaccgggctctgcgcac
agcatgatggggcccagtccggggcctccctcagcaggacatcccatcccgacccaggga
cctggagggtaccctcaggacaacatgcatcagatgcacaagccaatggagtccatgcat
gagaagggcatgtcggatgacccccgctacaaccagatgaagggaatggggatgcggtcg
ggggcccatgcagggatggggcctccgccaagccccatggaccagcactcccaaggttac
ccctcccccctgggtggctccgagcatgcctccagtccggttccagccagtggcccatcc
tcaggcccacagatgtcctctgggccaggtggggcccccctggatggtgccgatccccag
gctttgggacagcagaaccggggcccgactccgtttaaccagaaccagctgcatcagctc
cgagcccagatcatggcgtacaagatgctggccagggggcagcccctccccgaccacctg
cagatggcagtgcaggggaagcggccgatgcccgggatgcagcagcagatgccagcgcta
cctccaccctctgtgtccgccacgggacctggccccgggcctggccctggacctggcccg
ggtccgggaccagcacctccaaattacagccggcctcacggtatgggagggcccaacatg
ccccccccaggaccctcaggagtgccccctgggatgccaggtcagccccccggagggcct
cccaagccttggcctgaaggacccatggcgaatgctgctgcccccacgagcacacctcag
aagctgatccccccacagccaacgggtcgcccctcacctgcgcccccagccgtcccaccc
gctgcctccccggtgatgccgccccagacgcagtcgccggggcagcctgcccagcctgcc
cccatggtcccattgcaccagaagcagagccgcatcacccccatccagaagccgcggggc
ctggaccctgtggagatcctgcaggagcgggagtacaggctgcaggctcgaatcgcacac
agaattcaggaacttgaaaaccttcccgggtccctggccggggatttgcgaaccaaagcg
accattgagctcaaggccctcaggctgctgaacttccagaggcagctgcgacaggaagtg
gtggtgtgcatgaggagggacacggccctggagacggccctcaatgccaaggcctacaag
cgcagcaagcggcagtccctgcgtgaggcccgcatcaccgagaagctggagaagcagcag
aagatcgagcaggagcgcaagcgccggcagaagcaccaggagtacctcaacagcattctg
cagcatgccaaggatttcaaagaatatcacagatcggtcacaggcaaaatccagaaactc
acgaaggcggtggccacctaccacgccaacacagagagggagcagaagaaggaaaacgaa
agaattgagaaagagagaatgcggagactcatggcggaagatgaggagggctaccgcaag
ctcatcgaccagaagaaggacaagcgcttggcctacctcttgcagcagacagacgagtac
gtggctaacctcacggagctggtgcggcagcacaaggctgcccaggtcgccaaggagaaa
aagaagaaaaagaaaaagaagaaggcagaaaatgcagaaggacagacgcctgctatcgga
cctgatggcgagcctctggatgagaccagccaaatgagtgacctgccagtgaaagtgatc
cacgtggagagcggaaagatcctcacgggcaccgacgcccccaaagcagggcagctagaa
gcctggcttgagatgaacccgggatatgaagtagctccgagatctgatagtgaagaaagt
ggctcagaagaagaggaggaggaggaggaggaggagcagccgcagccagcacagcctccc
aaccttcctgttgaggagaagaagaagattccagacccagacagcgacgatgtctcggag
gtggacgcccggcacatcattgagaatgccaagcaagacgtggatgatgagtatggcgtg
tcccaggccctcgctcggggcctgcagtcctactacgcggtggcgcacgcggtcactgag
cgagtggataagcagtcagcgcttatggtcaatggcgtcctcaagcagtaccagatcaag
ggcttggagtggctggtgtccctgtacaataacaacctgaacggcatcctggccgacgag
atgggcctgggcaagaccatccagaccatcgctctcatcacatacctcatggagcacaag
cggatcaacggaccctttctcatcatagtacctctctccacgctgtcaaactgggcatac
gaatttgacaagtgggccccctctgtggtgaaggtgtcctacaagggttctccagcagcc
agacgtgctttcgtcccccagctccgaagtggcaagttcaatgtcttgctgacgacttat
gagtacatcattaaggataagcacatccttgcgaagatccgttggaagtacatgattgtt
gatgaaggccaccgaatgaaaaaccaccactgcaagctgacgcaggtcctcaacacgcac
tacgtggcccctcgccgcctgctgctgacaggcacaccgctgcagaacaagcttcccgag
ctctgggcgctcctcaacttcctgctgcccaccatcttcaagagctgtagcaccttcgag
cagtggttcaacgcgcccttcgccatgaccggagaaaaggtggacctgaacgaggaggag
acgattctcatcatccgtcgtctccacaaagtgctgcggcccttcctgctccggcgactc
aagaaggaagtcgaagcccagttgcctgagaaagtggaatacgtcatcaagtgtgacatg
tctgcgctccagcgcgtgctctaccggcacatgcaggccaagggggtgctgctcaccgac
ggctccgagaaggacaagaagggcaagggcggcaccaagaccctgatgaacaccatcatg
cagctgcggaagatctgcaaccacccgtacatgttccagcacatcgaggagtccttctct
gagcacttggggtttaccggtggcattgtgcaagggctggacctgtaccgagcctcgggg
aagtttgagctgctcgataggatccttcccaaactccgtgcgactagccacaaagtgctg
ctgttctgtcagatgacctccctcatgacgatcatggaagactattttgcgtatcgcggc
tttaaatacctcaggctcgatggaacgacaaaagcggaagaccggggcatgctgctgaaa
accttcaatgagccgggctccgagtacttcatcttcctgctcagcacccgcgccgggggg
ctcgggctcaacctccagtcggccgacactgtgatcatcttcgacagcgactggaaccct
caccaggacctgcaagcccaggaccgcgcccaccgcatcgggcagcagaacgaggtgcgg
gtgctccgtctgtgcacggtcaacagcgtagaggagaagattctggccgcggccaagtac
aagctcaatgttgaccagaaggtgatccaggctggcatgttcgatcagaagtcctccagc
cacgagaggcgtgccttcctgcaggccatcctcgagcacgaggagcaggacgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaagaagacgaagtgcccgacgacgag
acggtgaaccaaatgattgcccggcacgaggaggagtttgacctgttcatgcgcatggac
ctggaccgcaggcgagaggaggcccgaaaccccaagcggaagccgcgcctgatggaggag
gacgagctcccctcgtggatcatcaaggacgacgctgaggtggagcggctgacctgcgag
gaggaggaggagaagatgttcggccgcggctcccgccaccgcaaggaggtggactacagc
gactcgctgaccgagaagcagtggctcaagaccctgaaggccatcgaggagggcacgctg
gaggagattgaagaggaggtccggcagaagaaatcgtctcggaagcgcaagcgggacagt
gatgccggctcctccaccccaaccaccagcacccgcagccgcgacaaggacgacgagagc
aagaagcagaagaagcgcggccggccacccgccgagaagctgtccccaaaccctcccaac
ctcaccaagaagatgaagaagatcgtggacgccgtgatcaagtacaaggacagcagtagt
ggacgtcagctcagcgaggttttcatccagctgccttcccgcaaggagctgcccgagtat
tacgagctcatccgcaagcctgtggacttcaagaagataaaggagcgcatccgcaaccac
aagtaccgcagcctcaatgacctggagaaggacgtcatgctgctgtgccagaacgctcag
accttcaacctggagggttccctgatctatgaagactccatcgtcctgcagtcggttttc
accagcgtgcggcagaaaatagagaaagaagatgacagcgagggcgaggagagtgaggaa
gaggaggagggcgaggaagaaggctctgagtctgagtcccgctccgtcaaagtgaagatt
aagctgggccggaaggagaaggcgcaggatcggctgaaggggggccggcggcggccgagc
cgcggttcgcgggccaagccggtggtgagcgacgacgacagcgaagaggagcaggaggag
gaccgctcaggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
