Lutra lutra (Eurasian river otter): 125084740
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Entry
125084740 CDS
T08100
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125084740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
llv04990
]
125084740
Domain-containing proteins not elsewhere classified [BR:
llv04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125084740
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
DUF3322
Motif
Other DBs
NCBI-GeneID:
125084740
NCBI-ProteinID:
XP_047558454
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All DBs
Position
14:complement(56161399..56208386)
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AA seq
329 aa
AA seq
DB search
MTTQQIVLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAIANLCIGDVITAIDGENTSS
MTHLEAQNKIKGCTDNMTLTVTRSEQKIWSPLVTEEGKRHPYKMNLASEPQEVLHIGSAH
NRSAMPFTASPASSSAPRVITNQYNNPAGLYSSENITNFNNALESKTAAGGQETNGRALD
HSQLPSGLVIDKESEVYKMLQEKQELNEPPKQSTSFLVLQEILESEEKGDPSKPSGFRSV
KAPVTKVAASIGNAQKLPMCDKCGTGIVGVFVKLRDRHRHPECYVCTDCGTNLKQKGHFF
VEDQIYCEKHARERVTPPEGYDVVTVFPK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccagcagatagtccttcagggcccgggaccgtggggcttccgcctcgtgggg
ggcaaggacttcgagcaacccctggccatttcccgggtcactcccggaagcaaggctgcg
atagctaacttatgcatcggagatgtgatcacagccatcgatggggaaaataccagcagc
atgacacacttggaagctcagaacaaaatcaagggctgcacagacaacatgactctcaca
gtcaccagatcggaacaaaagatctggtcccccctggtgaccgaggaagggaaacgtcat
ccatacaagatgaatttagcctctgaaccccaagaggtgctgcacatagggagtgcccac
aaccggagtgccatgcccttcactgcctcaccggcctccagctctgcccccagggtcatc
acaaaccagtacaacaacccggctggcctctattcctctgaaaacataaccaacttcaac
aacgccttggagtccaagacagcagccggcgggcaggagaccaacggcagagccttagac
cattctcagcttccaagcggactcgtcatcgacaaagaatctgaagtttacaagatgctt
caagagaaacaggagttaaatgagccccccaagcagtccacttcgttcctggttttgcag
gaaatcctagagtctgaggagaaaggggatcccagcaaaccctcaggtttcagaagcgtc
aaggctccagtcaccaaagtggcagcgtcgattggaaatgcccagaagttgcccatgtgt
gacaaatgtggcaccggtattgtcggcgtgtttgtgaagctgcgagaccgccaccgtcac
cctgagtgttacgtgtgcactgactgtggcaccaacctgaaacagaagggccacttcttc
gtggaggaccaaatctactgtgaaaagcacgcccgggagcgggtcacaccccctgagggt
tatgacgtggtcactgtgttccccaagtga
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