Lutra lutra (Eurasian river otter): 125084809
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Entry
125084809 CDS
T08100
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
llv03009
]
125084809
03036 Chromosome and associated proteins [BR:
llv03036
]
125084809
Enzymes [BR:
llv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125084809
Ribosome biogenesis [BR:
llv03009
]
Eukaryotic type
Pre-60S particles
Helicases
125084809
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
125084809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_30
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
125084809
NCBI-ProteinID:
XP_047558591
LinkDB
All DBs
Position
14:31429280..31456147
Genome browser
AA seq
791 aa
AA seq
DB search
MPGKLLSDADLDSDTAMEKVEIPRKQKGRKEKPKSNKTEEAAEVKEEIISPKAKKVKKKA
ESNEVDLSSPKSKKAKNKEEPSQDNMIPPKTKSVKKPKETIEKKVVSPKIKKAVKSEEPS
EEEIDAPKPKKMKREKEMNGEIREKGPKLKNGFPHSGPISNSSETPGEESNSEVEQEVPV
EQKEGAFSNFPISEQTIKLLKARGVTFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFA
IPLVEKLQGELQDRKRGRAPQVLVLAPTRELANQVSRDFSDITRKLAVACFYGGTPYGGQ
IERMRNGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILSVAY
KKDSEDNPQTLLFSATCPHWVYNVAKKYMKSTYEQVDLIGKKAQKTAITVEHLAIKCHWT
QRAAVIGDVIRVYSGFQGRTIIFCETKKEAQELSQNVAIKQDAQSLHGDIPQKQREITLK
GFRNGDFGVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAGRTGICICFY
QHKEECQLAQVEQKAGIKFKRIGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSAEKL
IEEKGAVEALAAALAHISGATSVDQRSLINSDAGFVTMILRCSIEMPNISYAWKELKEQL
SEDIDSKVKGMVFLKGKQGVCFDVPTAAVTEIQEKWHDSRRWQLSVATEQPELEGPREGY
RGFRGQREGSRGFRGQREGSRFRGQREGNRNFRGQREGNRGFRGQRSGGGNKSNRSQNKG
QKRSFSKAFGQ
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcaaactcctcagtgacgcggacttggactcagacacggccatggaaaaagtg
gaaataccgcgaaagcagaaaggtagaaaagagaagccaaaatctaataagactgaagag
gcagcagaagtaaaggaagaaattatttcccccaaagctaaaaaagttaaaaagaaagct
gagtctaatgaggttgacttgagttctcctaaatccaaaaaggcaaaaaacaaagaggag
ccatctcaggataatatgattcctcctaaaaccaaaagtgtgaaaaaaccaaaggagacc
attgaaaagaaagttgtttctcctaaaatcaaaaaggcagtaaaaagtgaagaaccttct
gaagaagaaatagatgctcctaagcccaagaagatgaagagagaaaaggaaatgaatgga
gaaattagagagaaaggccccaagctgaagaatggattccctcattctggacccatctcc
aactccagtgaaaccccaggggaagaaagtaacagtgaagtagagcaggaagtacctgtg
gaacaaaaagaaggagctttctctaattttcccatatctgaacagactattaaacttctc
aaagcccgtggggtgaccttcctgtttcctatacaagcaaagacatttcaccatgtctat
agtggaaaagacttaattgcacaggcacggacaggaactgggaagacattctcctttgct
atccctttggttgagaagcttcagggagaactgcaagaccggaaaagaggccgtgcccct
caggtgctggttcttgcacccacgagggagctggcaaatcaagtaagcagagacttcagt
gacatcacaagaaagctggcagtggcttgtttttatggtggaactccctatggaggtcag
attgaacgcatgcggaatgggattgatatcctggttgggaccccaggtcgaatcaaagac
cacctacagaatggcaagctggatctcaccaaacttaagcatgttgtcctggatgaagtt
gaccagatgctggatatggggtttgctgatcaagtggaagagattttaagtgtggcatac
aagaaagattcagaagacaatccccaaacattgcttttttctgccacttgccctcattgg
gtatataatgttgctaagaaatacatgaaatctacatatgaacaggtggacctgattggt
aaaaaggcccagaaaacggcaataactgtggagcacctggctattaagtgccactggact
caaagggcagcagttattggggacgtgatccgagtatatagcggttttcaggggcgcact
atcatcttctgcgaaaccaagaaagaagcccaggagttgtcgcagaatgtggccataaaa
caggatgcccagtcattacatggagatattcctcagaagcagagagaaatcactttgaaa
ggctttagaaatggtgattttggagttctggttgcaaccaatgttgccgctcgcgggtta
gacatccctgaggttgatctggttgtacagagttctccaccaaaggacgtggagtcctac
attcatcgttctgggaggacaggtagagctggaaggacggggatttgcatctgcttttat
cagcacaaggaagaatgtcagttagcacaagtggagcaaaaagcgggtattaaatttaag
cgaataggggttccctctgcaacagagataataaaagcttccagcaaagatgccatcagg
cttttggattctgtgcctcccactgccatcagtcacttcaagcagtccgcagagaagctg
atagaggagaagggagccgtggaggccttggcagcagctctggcccatatttcaggagcc
acgtcggtggaccagcgctctctgatcaactcagatgcaggctttgtgaccatgatctta
cgatgctcaattgaaatgccaaacattagttatgcttggaaagagcttaaagagcagctg
agtgaggatattgattccaaagtgaaaggaatggtttttctcaaaggaaagcagggtgtt
tgctttgatgtccctactgcagcagtaacagaaatacaggaaaaatggcatgattcacgg
cgctggcagctctcggtggccacggagcagccagagctggaaggaccacgggaaggatat
cgaggcttccgagggcagcgagaaggcagtcgagggttccggggacagcgggaaggcagt
cgctttagaggacagcgggaaggaaacagaaacttcaggggacagcgggaaggaaatcga
ggcttcagaggacagcgatcaggaggtggcaacaaaagtaacagatcccaaaacaaaggc
cagaagcggagtttcagtaaagcattcggacagtaa
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