Lutra lutra (Eurasian river otter): 125084841
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Entry
125084841 CDS
T08100
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03010
Ribosome
llv04120
Ubiquitin mediated proteolysis
llv04137
Mitophagy - animal
llv04140
Autophagy - animal
llv05012
Parkinson disease
llv05022
Pathways of neurodegeneration - multiple diseases
llv05167
Kaposi sarcoma-associated herpesvirus infection
llv05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
125084841
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125084841
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125084841
04137 Mitophagy - animal
125084841
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
125084841
05167 Kaposi sarcoma-associated herpesvirus infection
125084841
09164 Neurodegenerative disease
05012 Parkinson disease
125084841
05022 Pathways of neurodegeneration - multiple diseases
125084841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
llv03011
]
125084841
04121 Ubiquitin system [BR:
llv04121
]
125084841
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
llv04147
]
125084841
Ribosome [BR:
llv03011
]
Ribosomal proteins
Eukaryotes
Small subunit
125084841
Archaea
125084841
Ubiquitin system [BR:
llv04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
125084841
Exosome [BR:
llv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125084841
Exosomal proteins of colorectal cancer cells
125084841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
125084841
NCBI-ProteinID:
XP_047558681
LinkDB
All DBs
Position
14:6811092..6811637
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRE
CPSDECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtgaaaactcttacggggaagaccattactctcgaggttgaaccctcg
gatacaatagaaaatgtgaaggccaagattcaggacaaggaaggaattcctcctgatcag
cagagactgatctttgctggcaagcaactggaagatggacgtactttgtctgactacaac
attcaaaaggagtccactcttcatcttgtgttgagacttcgtggtggtgctaagaaaagg
aagaagaagtcttataccactcccaagaagaataagcataagagaaagaaggttaaactg
gccgtcctgaaatactataaggtggatgagaatggcaaaatcagtcgccttcgtcgggag
tgcccttcagatgagtgtggtgctggagtttttatggctagccactttgacagacattac
tgtggcaaatgttgtctgacttactgcttcaacaaaccagaagacaagtga
DBGET
integrated database retrieval system
