Lutra lutra (Eurasian river otter): 125085111
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Entry
125085111 CDS
T08100
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125085111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
llv03019
]
125085111
Messenger RNA biogenesis [BR:
llv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125085111
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
125085111
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
125085111
NCBI-ProteinID:
XP_047559254
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All DBs
Position
14:complement(58072748..58084398)
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AA seq
207 aa
AA seq
DB search
MRSRRRFPPLAVMAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKSSENG
ALPVISVMRETESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDV
RATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPIS
WCEMQCPKTHTKEFRKVARVQPEFLQT
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtcgacgtcgtttccctccactggcagtcatggcgccacccgtgaggtactgc
attcccggcgaacgtctgtgtaacttggaggagggcagcccgggcagcggcacttacacc
cgacacggctacatcttttcttcgcttgctggctgcctgacgaagagcagcgagaacggc
gcgcttcctgtcatttctgtgatgagagaaacagagtcccaactactaccggatgtgggg
gctattgtaacctgtaaggtctctagcatcaattcacgctttgccaaagtgcacatcctg
tatgtagggtccacaccacttaagaactcttttcgaggaactatccgcaaggaagatgtc
cgagctactgaaaaagacaaggtagagatttataagagtttccgcccaggtgacattgtc
ttggccaaagtgatctccctgggtgacgcacaatccaactacctcctgaccactgccgag
aacgagctcggggtggtggtggcccacagtgaatcaggtgtccagatggttcccattagt
tggtgtgagatgcagtgccctaagacccacactaaagaattccggaaagtggcccgagtg
cagcctgaattcctgcagacctaa
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