Lutra lutra (Eurasian river otter): 125085203
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Entry
125085203 CDS
T08100
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04510
Focal adhesion
llv04520
Adherens junction
llv04670
Leukocyte transendothelial migration
llv04810
Regulation of actin cytoskeleton
llv04820
Cytoskeleton in muscle cells
llv05100
Bacterial invasion of epithelial cells
llv05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125085203
04520 Adherens junction
125085203
09142 Cell motility
04820 Cytoskeleton in muscle cells
125085203
04810 Regulation of actin cytoskeleton
125085203
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
125085203
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125085203
09174 Infectious disease: parasitic
05146 Amoebiasis
125085203
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
llv04812
]
125085203
04147 Exosome [BR:
llv04147
]
125085203
Cytoskeleton proteins [BR:
llv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125085203
Exosome [BR:
llv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125085203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
125085203
NCBI-ProteinID:
XP_047559438
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Position
14:35736550..35855124
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AA seq
1135 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAI
RQILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQG
LDVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALTEARKIA
ELCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNR
AVANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQ
DLLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKTRMQEAMTQEVSDVF
SDTTTPIKLLAVAATAPPDAPSREEVFDERAANFEHHSGRLGATAEKAAAVGTANKATVE
GIQASVKTARELTPQVISAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQE
PDFPPPPPDLEQLRLADELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMM
MAARQLHDEARKWSSKPGNRAAEVGVGVVAEADAADAVGFPVPPDMEDDFEPELLLMPSN
QPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCA
KDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNI
SDEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcatacgcgcacgatcgagagcatcttggagccggtggcgcagcagatc
tcgcacctggtgatcatgcacgaggaaggcgaggtggacggcaaagccatccctgacctc
accgcgcccgtggccgccgtgcaggcggccgtcagcaaccttgtccgggttggaaaagag
actgttcaaaccactgaggatcaaattttgaagagagatatgccaccagcatttattaag
gttgagaacgcttgcaccaagctcgtgcaggcagcccagatgcttcagtcggatccttat
tctgtgcccgctcgagattatctcatcgatgggtcaaggggcatcctctctggcacatca
gacctgcttctcaccttcgatgaggctgaggttcgtaaaattattagagtttgcaaagga
attttggaatatcttacagtggcagaggtggtggaaaccatggaagatttggtcacctac
acaaagaatcttggaccaggaatgacaaagatggccaagatgattgatgagaggcagcag
gaactgactcaccaggagcaccgagtgatgttggtgaactccatgaacactgtgaaagag
ttgctgccagttctcatttccgctatgaagatttttgtgacaactaaaaattcaaaaaat
caaggaatagaagaagctttgaaaaatcgcaattttactgtagagaagatgagtgctgaa
attaatgaaatcattcgcgtcttacaactcacttcttgggatgaagatgcctgggccagc
aagaaggacactgaagccatgaagagagcactggcctctatagactccaaactgaaccag
gccaaaggttggctccgtgaccccagtgcctctccaggggatgccggtgagcaggccatc
agacagatcttagatgaagctggaaaagtcggtgaactctgtgcaggcaaagaacgcagg
gagatcctgggaacctgtaaaatgctggggcagatgactgatcaagtggctgacctccga
gccagaggacaaggggcctcacccgtggccatgcagaaagcccagcaggtgtcgcagggt
ctggatgtgctcacagcaaaagtggaaaatgcagctcgcaagctggaagctatgaccaac
tccaagcagagcattgccaagaagattgatgctgctcagaattggcttgcagatccaaat
ggaggaccagaaggagaagaacagattcgaggggctctgactgaagctcggaagatagca
gaattatgtgatgatcctaaagagagagatgacattctacgttctcttggggaaatatcc
gctctgacttctaaattagcagatttacggagacagggcaaaggagattccccagaggcc
cgagcattggccaaacaggtggccacagccctgcagaacttgcagaccaaaaccaataga
gctgtggccaacagcaggcccgcgaaggcagctgtccacctggagggcaagattgagcag
gcacagcggtggattgataatcccacagtggatgaccggggcgttggtcaggctgccatc
cggggccttgtagccgaagggcatcgtctggctaatgtcatgatggggccatatcgccaa
gatcttcttgcaaagtgtgaccgcgtggaccagctgacggcccagttggctgacctggct
gccagaggggaaggagagagtcctcaggcgagagcccttgcctctcagctccaagactcc
ttaaaggatctgaaaacccggatgcaagaggcgatgactcaggaggtgtccgatgttttc
agcgataccacaactcccatcaagctgttggcggtggcagccactgcgcctcctgatgct
cccagtagggaggaagtatttgatgagagggcggctaacttcgagcaccattcaggaagg
cttggtgccactgcggagaaggcggctgctgttggaactgctaataaagccacagtggaa
ggcattcaggcatcagtaaagacggcccgagaacttacaccccaggtcatctcagctgct
cgcatcttacttaggaatcctggaaatcaagctgcttatgaacattttgagaccatgaag
aaccagtggatcgataatgtcgagaaaatgacagggctggtggacgaagctatcgatacc
aaatctctgctggatgcttctgaagaagcaattaaaaaagatctggacaagtgtaaagta
gccatggccaacatccagccacagatgctggtcgccggggccaccagcatcgcccgccgg
gccaatcgtatcctgcttgtggccaagagggaggtggagaactcggaggatcccaagttc
cgcgaggctgtgaaagccgcctctgacgaattgagcaagaccatctctcccatggtgatg
gacgccaaggctgtggccggaaacatctctgaccctggcctgcaaaagagcttcctggac
tcgggttatcggatcctgggagctgtggccaaggtcagagaagccttccaacctcaggag
cctgacttcccacctcctcctccggatctcgaacagctccgtctggccgatgagcttgct
cctcccaaaccacctctgcctgagggtgaggtccctccgcccaggcccccaccaccagag
gagaaggatgaagagttccctgagcagaaagccggggaggtgatcaaccagccaatgatg
atggctgccaggcagctccatgatgaggctcgcaagtggtccagcaagccaggtaaccgg
gccgctgaggtgggtgtaggtgttgtagctgaggcagatgcggccgatgctgttgggttc
cctgtcccccctgacatggaagacgatttcgaacctgagctgctgttaatgccatccaat
cagccggtcaaccagcccattctggccgcggctcagtccctgcatcgggaagctaccaag
tggtctagtaagggcaatgacatcattgcagcagccaagcgcatggctctgctgatggct
gagatgtctcggctagtaagagggggcagtggtaccaagcgggcactgattcagtgtgcc
aaggacattgccaaggcctcagatgaggtgacgcggttggccaaggaggttgccaagcag
tgcacagataagcggattagaaccaacctcttacaggtatgcgagcgaatcccaaccata
agcacccaactcaagatcctgtccacggtgaaggccactatgctgggccggaccaacatc
agcgacgaggagtctgagcaggccacagagatgctggttcacaatgcccagaaccttatg
cagtctgtgaaggagaccgttcgagaagcagaagctgcttcaatcaaaattcgaacagat
gctggatttacactacgctgggttagaaagactccctggtaccagtag
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