Lutra lutra (Eurasian river otter): 125085507
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Entry
125085507 CDS
T08100
Name
(RefSeq) rho guanine nucleotide exchange factor 2 isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04530
Tight junction
llv05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125085507
09160 Human Diseases
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
125085507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125085507
Membrane trafficking [BR:
llv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125085507
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
C1_1
C1_2
Prok-RING_1
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
125085507
NCBI-ProteinID:
XP_047559874
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Position
15:68257713..68296870
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AA seq
1185 aa
AA seq
DB search
MNGDVPEVFLAGGDLVSQGHTRRCLSAVESREQLEEDKEEEEEEEGKTEKGDGFHAVPLR
RSGAFRAHGHNHSPFKRHSWGPGREHQDPLSRHELQAPGCTGAREATLLQSREELDNFLG
PQCQGSQPAHADQNCCHPSVGTLAHSAPGVLSKSVSMSGISSLLGCSDPAGTLRQSSAAA
LSQSCSQLERGSGSWTGSPLQRTLSFLLGMTGKAKTREKEKMKEAKDARYTNGHLFTTIS
VSGMTMCYACNKSITAKEALICPTCNVTIHNRCKDALANCTKVKQKQQKAALLKNNTALQ
SVSLRSKTTPRERPSSAIYPSDSFRQSLLGSRRGRSSLSLAKSVSTTNIAGHFNEESPLG
LRRILSQSTDSLNMRNRTLSVESLIDEGAEVIYSELMSDFETDERDFAADSWSLAVDSGF
LQQQKKEVMKQQDVIYELIQTELHHVRTLKIMTRLFRTGMLEELQLEPGVVQGLFPCVDE
LSDIHTRFLSQLLERRRQSLCSGSTRNFVIHRLGDLLISQFSGPSAEQMRKTYSEFCSRH
TKALKLYKELCARDKRFQQFIRKVTRSAVLKRHGVQECILLVTQRVTKYPVLISRILQHS
HGPEEERRDLTTALGLVKELLSNVDQDVHELEKGARLQEIYHRMDPRAQAPVPGKGPFGR
EELLRRRLIHDGCLLWKTATGRFKDVLMLLMTDVLLFLQEKDQKYIFPALDKPSVVSLQN
LIVRDIANQEKGMFLISAAPPEMYEVHTASRDDRSTWIRVIQQSVRVCPSREDFPLIETE
HEAYLRRIKMELQQKDQALVELLQEKVGLFAEMTHFQVDEDGGGLTLPALPRGLFRSESL
ECPRGERLLQDAIREVEGLKDLLVGPGVELLLTAREPALPGDLDSGGSTSPGVTANGEAG
TFNGSTELCGTDSDSSRKVGLPQDRNGNQLRAPQEEALQRLVNLYGLLHGLQAAVAQQDT
LMEARFPEGPERREKLARANSRDGEAGRAAPAPPAPDKQATELALLQRQHALLQEELRRC
RRLGEERATEAGSLEARLRESEQARARLEREAEEARRQLAALGHSEPPPAEAPWARRPLD
PRRRSLPAGDALYLSFTPPQPSRGHERLDLSVTIRSVHRPFEDRERQDLGSPEERLQDSS
DPDTGSEEEGGSRLSPPHSPREFTRMQDIPEEIESRDGEPVASES
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagacgtcccagaggtgttcctcgcaggcggagacctggtgtcccaaggccac
actcgccgctgcctgtctgcagtcgagtccagagagcagctggaggaagacaaggaggaa
gaggaggaggaggagggaaaaacagagaagggagatggcttccacgctgtacccctccgg
aggtcgggggccttccgtgcccatggccacaaccacagcccgttcaaaagacatagctgg
gggccaggcagggagcaccaggatccactgagcaggcacgaactgcaggcaccgggatgc
acaggcgccagggaggccaccttgctgcagagccgagaggagctggacaactttctggga
ccacagtgccaaggcagtcagcccgcccacgcggatcagaattgctgtcatccgtctgtt
ggcactttggcccactcggcccctggcgtgctctccaagtctgtatccatgagtggcatc
agtagcctcttgggatgctctgatccagctgggaccttacgccagtcctccgccgctgcc
ctcagccaaagctgtagccaactggaacggggctctggaagctggacaggatcccctctg
cagcgcaccctcagcttcctcctgggcatgaccggaaaggccaagacccgggaaaaggag
aagatgaaggaagccaaggacgcccgctataccaacgggcatctcttcaccaccatctca
gtctcgggcatgaccatgtgctatgcttgtaacaagagcatcacggccaaggaggccctc
atctgccccacctgcaatgtgactatccacaaccgctgtaaagacgcgctcgccaactgc
accaaggtcaaacagaagcaacagaaagccgccctgttgaagaacaacactgccttgcag
tctgtctcccttcgcagtaagaccaccccccgggagcggccgagctctgccatttacccc
tcggacagcttccggcaatccctgctcggttcccgccgcggccgctcctccttgtcactg
gccaagagtgtctccaccaccaacatcgctggacatttcaacgaagagtcccccttgggg
ctgcggcggatcctgtcccagtccacggactccctcaacatgcggaaccggaccctgtct
gtggagtccctcattgacgaaggtgcagaggtgatctacagtgagctgatgagtgacttt
gagacagacgagagggacttcgcagctgactcgtggagcttggccgtggacagcggcttc
ctacagcagcagaagaaggaggtgatgaagcagcaggacgtcatctacgagctcatccag
acggagctgcaccatgtgcggacgctgaagatcatgacgcggctgttccgcacgggcatg
ctggaggagctgcagcttgaacccggcgtggtgcaggggctgttcccctgcgtggacgag
ctcagcgacatccacacgcgcttcctcagccagttgctggaacgccgccgccagtccctg
tgctccggcagtacccgcaacttcgtcatccaccgcttgggtgacctgctcatcagccag
ttctcaggtcccagcgccgagcagatgcggaagacctactccgagttctgcagccgccac
accaaggccttaaagctctacaaggagctgtgtgcacgcgacaagcggttccagcagttc
atccggaaggtgacgcggtccgcggtgctgaagcggcatggggtgcaggagtgcatcctg
ctggtgacccagcgtgtcaccaagtacccggtgctcatcagccgcatcctgcagcactcc
cacgggcccgaggaggaacgccgggacctgaccactgccctggggctggtgaaggagctg
ctgtccaacgtggaccaggatgtgcacgagctggagaaaggagcccgcctgcaggagatc
taccatcgcatggacccgcgggcgcaggccccggtgcccggcaagggcccgtttggccgg
gaggagctccttcgccgcagactcatccacgacggctgcctgctgtggaagacggctacc
ggccgcttcaaagacgtcctaatgctgctgatgacggacgtgctgctgttcctgcaggag
aaggaccagaagtacatctttcctgccctggacaagccctccgtggtatcgctgcagaat
ctgattgtgcgggacatcgccaatcaggagaaagggatgttcctgatcagcgctgcaccc
cctgagatgtatgaggtccacacagcgtcccgggatgaccggagcacctggatccgcgtc
attcagcaaagtgtgcgcgtgtgcccgtccagagaggacttccccctgattgagacagag
cacgaggcttacctgcgccgaatcaagatggagcttcaacagaaagaccaggccttggtt
gagctgctgcaggagaaggtcgggctgtttgccgagatgacccatttccaggtggacgag
gatggtggcggcttgaccctgcctgccctacccaggggccttttccgctccgagtccctg
gagtgcccccgcggagagcggctgctgcaggatgccatccgtgaggtggagggtctgaaa
gacctcctggtggggcccggagtggagctgcttctgacagcccgggaaccagccttgccc
ggggacctggacagcggcggtagcacgagtcctggggtcactgccaacggtgaggccgga
accttcaacggctccactgagctctgcggaactgactcggactccagccggaaggtgggc
ctcccgcaggaccggaacggaaatcagctgagagccccccaggaggaagcgctgcagcga
ctggtcaatctctatgggcttctgcacggcctccaggcggccgtggcgcagcaggacacg
ctgatggaggcgcggttccccgagggccccgagcggcgggagaagctggcacgtgccaac
tcccgggacggggaggccggccgagccgcgcccgcgcccccggcgcccgacaagcaggcc
accgagctggcgctcctgcagcgacaacacgcgctgctgcaggaggagctgcggcgctgc
cggcggctgggcgaggagcgcgccaccgaggcgggcagcctggaggcgcggctccgcgag
agcgagcaggcgcgcgcccggctggagcgcgaggccgaggaggcccgcaggcagctggcg
gcgctgggccacagcgagccgccccccgccgaggccccctgggcgcgcagacccctggac
ccgcggcgccgcagcctccccgcgggcgacgcgctgtacctgagcttcacgcccccgcag
cccagccgaggccacgagcgcctggatttgtctgtgaccattcgctctgtccatcgaccc
tttgaggaccgagagaggcaggacctgggcagccccgaggagcggctgcaggacagcagc
gacccggacacgggcagcgaggaggaggggggcagccgcctgtccccgccccacagtccg
cgagaattcacccgaatgcaggacatcccagaagagatcgagagtcgtgatggggagcct
gtggcttcagagagctaa
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integrated database retrieval system
