Lutra lutra (Eurasian river otter): 125085561
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Entry
125085561 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec16B-like
KO
K20353
COPII coat assembly protein SEC16
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125085561
Membrane trafficking [BR:
llv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125085561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
125085561
NCBI-ProteinID:
XP_047560001
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All DBs
Position
15:24484797..24541531
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AA seq
1091 aa
AA seq
DB search
MEFWAPQWPPQPQGRPTAPAKDPDRGLQREGIHRAVPHSWQQXERGTSQRQDTHGSPASQ
QDPRTDHQQXRYASRPGERPWPVSGADYYEGGYPGQLYSRPGIEDPYWSYHSPALRKEYV
YGNYYYHGHPQQLLEERVPRQESPYIWQEDHRDQKYLTEQHQDSRNSLSAASNTGQEWPG
DLVPESLLPGTQKNKPPLADESNLLQQYESGLSSSAYELSQYMGDAPELYEPRAPAPWSP
DQAEAVSAPGPKDPMKFYIPHVPVSFGPGGQLVCVGPSSPRDGQTALVELHSMEVILNYS
EEQEELRTFSGPLIREDVHKVDIMTFCQQKAAQSLKSETQRSRDSALLWQLLVLLCRQKR
GKSMVGSDIAELLMQDCKKPKYKRQPPVANLIGLTDEDWPVLSSGTPNLLTGEIPPSVET
PAQIVEKFTXLLYYGRKKEALEWAMKNHLWGHALFLSSKMDPRTYSWVLSGFTSTLAAND
PLQTLFQFMSGRIPQAATCCADKQWGDWRPHLAVILSNQGGDPELLQRAIITMGDTLAGK
GLVEAAHFCYLMAHVPFGHYTVRTDHLALLGSSHSQEFLKFATTEAIQRTEIFEYCQMLG
RPKSFIPSFQVYKLLYASRLADFGLASQALHYCEAIGTALLSQEDSNHPVLLGELIKLAE
RLKLSDPLVVERRRGDRDPEPAWLVPLRRRHEELVHKVAADSGDLHSAHSDTAGARGTAE
STFYHDLSGHQSNSGDLGARPVLWPTLEQMGPGQPSPQQPAFPYQLSSHPAGGSVGQMGG
PVPLYSVPGTGGSLAVTGTPGGGAWEETQQIHPPLGESTVSQGSFQHPDGQNVVSEPQVP
AIPRSRNNSVSSTVSVKEDEEESSDEADDKPSQSPAQKEKPRDTKENTKSSGFGWFSWFR
SKPTNNASISGEDSSDSPDSEETSRASSPPEAGPGFTLTSLPEPQSLPGTLSGATGEGKV
QGSVSSGGATEGTGTGGLSGPEAVPSELYFNPGVLLPPTPLRGSVPLYNPSQVPQLSTTT
SLNRPNRLXSAPLSNPTMLRMATCPRLVSFLGFQPLYPIGAPRRLVLSYCLHWDRPFQNT
AQSSLFTLALE
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggagttttgggctccccagtggccaccacagccacaggggaggcccacagctccagca
aaggatccagaccgagggcttcagagagagggaattcatcgggctgttcctcactcttgg
caacaantggagagaggtaccagtcagcgacaagacacccacgggagccccgcatcacag
caggaccccaggacagaccaccagcagntccgttatgcatccaggcctggggaaaggcct
tggcctgtgtctggggctgactattatgaaggtggttatcccggtcagttgtattcaagg
ccaggcatcgaggatccgtattggagctatcattctccagccctaaggaaagaatatgtt
tatggaaattattactatcatggacacccgcagcagctgctggaagaaagagtgccaagg
caagagagtccttatatctggcaggaagaccaccgagatcagaagtacctaactgagcag
catcaggacagccggaatagtctaagcgctgcttctaacactggacaggagtggcctggg
gacctagttccggagagtctgctacctggaacccagaagaataagccacccctggctgac
gagtccaaccttctgcagcagtatgagtccgggctcagctccagcgcctatgagctcagc
cagtacatgggtgatgccccagagctgtacgagcccagagcgccggcaccttggagtcca
gatcaggccgaggctgtctcggcacctggtcccaaggatcccatgaagttctacatcccc
catgtgcctgtgagttttgggccaggaggccagctggtgtgtgtgggtcccagttctccc
agagatggacaaacggcccttgtggaactgcacagcatggaggttattcttaattactct
gaggaacaagaagagctgaggactttctcaggacccctgatcagggaagatgtacacaag
gtggatatcatgacattttgccagcagaaagcagctcagagcctaaaatccgagacacag
aggagcagagactcggctctactgtggcaattgttggttctcctttgccggcagaaacgg
ggtaaatccatggtggggtccgacatcgcggagctgctgatgcaagactgcaagaagccg
aagtacaagaggcagccgccggtggccaacctcatcggcctgaccgacgaggactggccg
gtgctgagctcagggaccccaaacttgctcaccggggagattccccccagcgtggagaca
cctgcacagatcgtagagaaattcactnaactgctctactatggaaggaagaaggaagcc
ttggagtgggccatgaagaaccacctgtggggccacgctttgttcctctccagcaagatg
gacccgaggacctacagctgggtcctgagcggcttcaccagcacgctggccgccaatgac
ccactacagaccctcttccagttcatgtccgggaggatcccacaagcagccacgtgctgt
gcggacaagcagtggggagactggagacctcacttggctgtgattctgtcgaatcagggc
ggggacccggagctgcttcagcgagccattatcaccatgggggacaccctggcagggaag
gggctggtggaggccgctcacttctgctacctcatggctcacgtgcccttcggccactac
accgtgaggactgaccatctggccttgcttggcagcagccacagtcaagagtttttgaaa
tttgcaacgaccgaggctatccagaggacggaaatcttcgagtactgtcagatgctgggc
cgccccaaatccttcatcccttctttccaggtgtataagctcctttatgcttcccggctg
gcagatttcggtcttgcgtcccaggccttgcattactgcgaagccatcggcacggccctc
cttagccaggaagacagcaatcaccctgtgctattaggggaactcatcaagctagcagag
agactgaagctgtccgatcccttggttgtagagagacgccgtggagacagggacccggag
ccagcctggctggtgccccttcgcaggcggcatgaggagctggtgcacaaggtagcagca
gacagtggggatctccattctgctcactcagataccgcaggagccagaggaacagcagaa
agcactttctaccatgatctctcgggacatcagagcaactcaggagaccttggtgctcgc
ccagtcttgtggccaaccctggagcagatgggcccaggccagcccagccctcagcagcca
gcctttccgtaccagctcagctcccacccagcaggaggaagtgtagggcagatggggggc
ccagtgcctctttactcagttcctgggactggtggcagcctggcagtgacagggactcct
ggaggaggagcctgggaggaaacccagcagatccacccaccccttggagagagcaccgtg
tctcaaggaagtttccagcatcccgatggtcaaaatgttgtttctgagcctcaggtgcca
gcgattcccagatcacgaaataattctgtgagttccactgtttcagtcaaggaggacgag
gaggagtcctcagatgaggcagatgataaaccttcccaaagcccggcacagaaagaaaag
ccacgagacacgaaagagaacacgaagagctcagggtttgggtggttcagctggtttcgc
tcgaagcccaccaacaacgcatccatctctggggaagactcatctgacagccccgactct
gaggagacctccagagcatcttctccgcctgaggctggccctggcttcacattgacctct
ctcccagagccccagtccctgccgggcaccttatctggagccacaggtgagggcaaagtc
caaggatcggtgtccagtgggggagccaccgagggtactgggactggaggcctgtctggg
cctgaggctgttccctctgagctttacttcaaccctggtgttctgcttcctccaaccccc
ttgagagggagtgttcctctctacaacccatctcaggtccctcagctctctacgactact
agtctgaaccgaccgaatcgcctangctcagcgccgctatccaacccaaccatgttgaga
atggccacctgtcccaggctggtctccttcctcggtttccagcccctctaccctattggg
gcccccaggaggcttgtcctgtcctattgcctccactgggacaggccgttccagaacaca
gctcagtccagtctcttcacattagctttggaatga
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integrated database retrieval system
