Lutra lutra (Eurasian river otter): 125085619 Help Entry 125085619         CDS       T08100                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism llv  Lutra lutra (Eurasian river otter) Pathway llv03040   Spliceosome Brite KEGG Orthology (KO) [BR:llv00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     125085619  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:llv03019]     125085619    03041 Spliceosome [BR:llv03041]     125085619 Messenger RNA biogenesis [BR:llv03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      125085619 Spliceosome [BR:llv03041]  Complex B   Other components    Prp19-related factors     125085619  Complex C     125085619 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C TPR_14 HAT_PRP39_N TPR_12 TPR_2 TPR_8 Suf TPR_19 TPR_15 ARM_TT21 ARM_TT21_C TPR_1 TPR_NPHP3 Motif Other DBs NCBI-GeneID:  125085619 NCBI-ProteinID:  XP_047560041 LinkDB All DBs Position 1:complement(217685044..217697708) Genome browser AA seq 855 aa AA seqDB search MVLMARLSRSERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA QFEESMIAAKMETASELGREEDDDVDLELRLARFEQLIGRRPLLLNSVLLRQNPHHVHEW HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKHAKTLYLLYA QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS DEHAREMCLRFADMECRLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA AEAERDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLE QQSVPAAVFGSLKED NT seq 2568 nt NT seq  +upstreamnt  +downstreamnt atggtgctgatggcgcgtctttcccggtcagagcggccggacctcgttttcgaagaagag gatctcccctatgaggaggagatcatgcggaaccagttctcggtcaagtgctggctccgc tacattgagttcaaacaaggtgccccgaagccccggctcaaccagctgtatgagcgggcg ctgaagctgctgccgtgcagctacaaactctggtaccgatacctgaaggcccgccgggcg caggtgaagcaccgctgtgtcactgaccctgcctatgaagacgtcaacaactgccacgag agggccttcgtgttcatgcacaagatgccccgtctgtggctggactactgccagttcctc atggaccagggccgcgtcacgcacacgcgccgcacgtttgaccgtgccctccgggccctg cccatcacccagcactcccgaatctggcccctgtacctgcgtttcctgcgctcccacccg ctgcccgagacggccgtgcggggctatcggcgcttcctcaagctcagccccgagagcgcg gaggagtacatcgagtacctcaagtccagtgaccggctcgacgaagccgcacagcgcctg gccactgtggtcaacgacgagcgcttcgtgtccaaggccggcaagtccaactaccagctg tggcacgagctttgtgacctcatctcccagaacccggacaaggtgcagtcgctcaacgtg gacgccatcatccgcgggggcctcacccgcttcacggaccagctgggcaagctctggtgc tcactggctgactactacatccgcagtggccacttcgaaaaggctcgagatgtgtatgag gaggccatccggaccgtgatgaccgtgcgcgacttcacgcaggtgtttgacagctacgca cagttcgaagagagcatgatcgcagccaagatggagaccgcctcggaactggggcgggag gaggacgatgacgtggacctggagctgcggctggcccgcttcgagcagctcatcggccgc cgccccctgctgctcaacagcgtcttgctgcgccagaacccgcaccatgtgcacgagtgg cacaagcgcgtggccctgcatcagggccgcccccgggagatcatcaacacgtacacggag gctgtgcagacggtggaccctttcaaggcgacgggcaagccccacacgctgtgggtcgca tttgccaagttttacgaggacaacgggcagctggacgatgcccgcatcatcttggagaag gccaccaaggtgagcttcaagcaggtggacgacctggccagcgtgtggtgcgagtgtggc gagctggagctccggcacgagaactacgaccaggccttgcggctgctgcggaaggccacc gcgctgcccgcccgccgtgccgagtacttcgacggctcagagcctgtgcagaaccgtgtg tacaagtcactgaaggtgtggtcgatgctcgctgacctagaggagagcctgggcaccttc cagtccaccaaggccgtatatgaccgcatcctggacctgcgcatcgccacgccccagatc gtcatcaactacgccatgttcctcgaggagcacaagtacttcgaggagagcttcaaggcg tacgagcgtggcatctcgctgttcaagtggcccaacgtgtcagacatctggagcacctac ctgaccaagttcatcgcccgctatgggggccgaaagctggagcgcgcacgggacctcttc gaacaggcgctggacggatgccctcccaaacatgccaagacgctctacctgctgtacgcg cagctggaggaggagtggggcctggcccggcacgccatggccgtgtacgagcgtgccacc agggccgtggagcccgcccagcagtacgacatgttcaacatctacatcaagcgcgcagcc gagatctacggcgtcacccatacccgcggcatctaccagaaggccatcgaggtgctgtcg gacgagcatgcccgggagatgtgcctgcgcttcgcggacatggagtgccgacttggcgag atcgaccgggcgcgtgccatctacagcttctgctcccagatctgtgacccccggaccacc ggggctttctggcagacgtggaaggacttcgaggtccggcatggcaacgaggacaccatc cgggagatgctgcggattcgccgcagcgtgcaggccacgtacaacactcaggtcaacttc atggcctcgcagatgctcaaggtgtcaggcagtgccacgggcactgtgtctgacctggcc cccgggcagagcggcatggacgacatgaagctgctggaacagcgggcggagcagctggcg gctgaggccgagcgggaccagcccccacgggcccagagcaagatcctgttcgtgaggagc gacgcctcccgggaagagctggccgagctggcccagcaggccaaccccgaggagattgag ctgggcgaggacgaggacgaggacgagatggacctggagcccaacgaggtgcggctggag cagcagagtgtgccggccgccgtgttcgggagcctgaaggaggactga

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