Lutra lutra (Eurasian river otter): 125085906
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Entry
125085906 CDS
T08100
Name
(RefSeq) tenascin-N isoform X1
KO
K06252
tenascin
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04151
PI3K-Akt signaling pathway
llv04510
Focal adhesion
llv04512
ECM-receptor interaction
llv05165
Human papillomavirus infection
llv05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125085906
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125085906
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125085906
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
125085906
09172 Infectious disease: viral
05165 Human papillomavirus infection
125085906
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
llv00536
]
125085906
Glycosaminoglycan binding proteins [BR:
llv00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125085906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Ig_DSCAM-DSCAML_C
DUF4998
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF_Teneurin
EGF_TEN
EGF_2
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
125085906
NCBI-ProteinID:
XP_047560776
LinkDB
All DBs
Position
15:complement(27212405..27274280)
Genome browser
AA seq
1560 aa
AA seq
DB search
MGLQGTFCFPLGLLIGSVLLVASAPATLEPHGCSDKEQQVTVSHTYKIDVPKSALVQVET
DPQPLSDDGASLLAPGEAEEQNIIFRHNIRLQTPQKDCELAGSVQGLLARVMKLEEEMAE
MREKCNVHRCCQGAAGGSHDCSGHGTFSPDTCTCRCEQGWEGAACERPACPGACSGHGHC
AAGRCECEPPYVGADCAYPACPDDCSGHGTCVRGVCQCHDDFTAEDCSERRCPGDCSGHG
FCDTGECYCEEGFRGLDCAQVVAPQGLQLLRSTEDSLLVSWEPSSEVDHYLLSYYPLGQE
LSGKQIQVPKEQHTYEITGLQPGTKYIVTLRNVKKEVSSSPQHLLATTDLAALGTAWVTD
ETENSLDVEWENPPTEVDYYKLQYGPLTGQEVAEVTVPKSSDPKSRYDITGLQPGTEYKI
TVVPMKGELEGKPILLNGRTEIDSPTNVVTDRVTEDTAVVSWVPVQAVIDKYVVRYTSAD
GDMKDTAIPREQSSTILTGLKPGEAYKVYVWAERGNQESKKADTNALTEIDSPTNLATDR
VTEDTATISWDPVRAVIDKYMVRYTSADGDTREVSVGKEQSSTVLTGLRPGVEYMVQVWA
QKGDRESKKADTKAPTEIDSPQNLVTDRVTEDTATISWDPVRAVIDKYMVRYTSADGDTR
EVSVGKEQSSTVLTGLRPGVEYMVQVWAQKGDRESKKADTKAPTEIDSPQNLVTDRVTED
TATISWDPVRAVIDKYMVRYTSADGDTREVSVGKEQSSTVLTGLRPGVEYMVQVWAQKGD
QESKKADTKAPTDIDSPTNLVTDRVTENTATISWDLVQAVIDKYMVRYTSADGDSREVSV
GKEQSSTVLMGLRPGVEYMVQVWAQKGAQESKKADTKALTDIDSPTNLVTDWVTEDTATI
SWDPVQAIIDKYMVRYISADGDTREVSVGKEQSSTVLTGLRPGVEYMVQVWAQKGDRESK
KADTKAPTEIDSPQNLVTDRVTEDTATISWDPVRAVIDKYMVRYTSADGDTREVSVGKEQ
SSTVLTGLRPGVEYKVQVWAQMGDRESKKADTKAPTDIDSPKNLVTNKVTEDTATISWDP
VRAVIDKYMVRYTSADGDTREVSVGKEQSSTVLTGLRPGVEYMVQVWAQKGDRESKKANA
TALTEIDSPQNLVTDRVTEDTATISWDPVQAVIDKYMVRYTSADGDTREVSVGKEQSTTA
LTGLRPGMEYMVQVWAQKGARESKKADTTALTDIDPPRNLRPSAVTQSGGVLTWTAPSAQ
IDGYILTYQFPDGTVKEVQLGRGDKRLELQGLEQGITYPVSLVAFKGDRRSRSVSTSLST
VGARFPHPADCSQVQQNSNVASGMYTIYLHGDSRRPLRVYCDMDTDGGGWIVFQRRNTGQ
LDFFKRWRTYVEGFGDPMKEFWLGLDKLHNLTTGTPTRYEVRVDLQTANESAYAVYDAFQ
VASSKERYRLSVGKYRGTAGDALTYHNGWKFTTFDRDNDIALSNCALTHHGGWWYKNCHL
ANPNGRYGETKHSEGVNWEPWKGHEFSIPYVELKIRPHGYSGEQVLGRKKRTLGENSRTF
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atgggtctccaggggacattctgcttccccctggggctcctcattggatctgtgcttttg
gtggcatcagccccagccactctcgaacctcacggctgcagcgacaaggagcaacaggtc
accgtcagccatacctacaagattgacgtgcccaagtctgcactggtccaggtggagact
gaccctcagcccctcagcgatgatggggcctcactcctggcaccgggggaggctgaggaa
cagaacatcatcttcaggcacaacatccgcctgcagacgccacagaaggactgtgagctg
gcaggcagcgtccaaggcctcctggcccgggtgatgaagttggaggaggagatggcagag
atgagggagaagtgcaatgtccaccgctgttgccaaggcgctgctggtgggagccacgac
tgcagcggccacgggaccttctcccccgacacctgcacctgccgttgcgagcagggctgg
gagggcgcggcgtgcgaacggcccgcctgccctggggcgtgcagcggtcatgggcactgc
gccgccggccgctgcgagtgcgagccgccgtacgtgggcgccgactgcgcctaccccgcc
tgccccgacgactgcagtggccacggcacgtgcgtgcgcggcgtctgccagtgccacgac
gacttcaccgccgaggactgcagcgagcgccgctgccccggcgactgcagcggccacggc
ttctgcgacacgggcgagtgttactgcgaggagggcttcagaggcctcgactgcgcccag
gtggtggctccccagggcctgcagctgctcaggagcacagaggattccctgctggtgagc
tgggagccctccagcgaggtggaccactacctcctcagctactaccctctggggcaggag
ctctctgggaagcagatccaagtgcccaaggagcagcatacctacgagatcactggtttg
cagcctggaaccaagtacatagttaccctgcgcaatgtgaagaaagaagtttccagcagc
ccacagcatctgcttgccacaacagatcttgccgcgcttggtactgcgtgggtgacggat
gagacagagaactcgcttgatgtggagtgggagaaccccccaaccgaggtggactactac
aagctgcagtacggccccctcacagggcaggaggtggccgaggtcactgtgcccaagagc
agtgaccccaagagtcgctatgacatcaccggtctgcagcccgggacagaatacaagatc
accgttgttcccatgaaaggagaactggagggcaagccaattctcctgaatggcaggaca
gaaattgatagcccaaccaatgtggtcactgatcgggtgacagaagacacagcggtggtc
tcctgggtccccgtccaggctgtcatagataagtacgtggtacgctacacctctgccgat
ggggacatgaaggacacggccatcccgagggagcagagcagcaccattctgacaggcctg
aagccaggagaggcgtacaaagtctacgtgtgggctgagagaggcaaccaggagagcaag
aaggctgacaccaatgccctcacagaaattgacagccccacaaatctggccaccgaccgg
gtgacagaggacacagccaccatctcctgggacccagtgcgagccgtcatcgacaagtat
atggtgcgctacacctcggccgatggcgacacccgggaggtgtccgtggggaaggagcag
agcagcaccgtcctgacaggcctgaggccgggtgtggagtacatggtccaggtgtgggcc
cagaagggggaccgggagagcaagaaggccgacaccaaggccccaacagaaattgacagc
ccccaaaacctggtgaccgaccgggtgacagaggacacagccaccatctcctgggaccca
gtgcgagccgtcatcgacaagtatatggtgcgctacacctcggccgatggcgacacccgg
gaggtgtccgtggggaaggagcagagcagcaccgtcctgacaggcctgaggccgggtgtg
gagtacatggtccaggtgtgggcccagaagggggaccgggagagcaagaaggccgacacc
aaggccccaacagaaattgacagcccccaaaacctggtgaccgaccgggtgacagaggac
acagccactatctcctgggacccagtgcgagccgtcatcgacaagtatatggtgcgctac
acctcggccgatggcgacacccgggaggtgtccgtggggaaggagcagagcagcaccgtc
ctgacaggcctgaggccgggtgtggagtacatggtccaggtgtgggcccagaagggggac
caggagagcaaaaaggctgacaccaaggcccccacagacattgacagcccaacaaacctg
gtaactgaccgggtgacagagaacacagccaccatttcctgggacctggtgcaggctgtc
atcgacaagtatatggtgcgctacacctcggctgatggagacagcagggaggtgtctgtg
gggaaggagcagagcagcaccgtcctgatgggcctgaggccgggtgtggagtacatggtc
caggtgtgggctcagaagggggctcaggagagcaagaaggctgacaccaaggccctaaca
gacattgacagcccaacaaacctggtgactgactgggtgacagaggacacagccactatc
tcctgggacccagtgcaagccatcattgacaagtatatggtgcgctacatctcggctgat
ggcgacacccgggaggtgtcagtggggaaggagcagagcagcaccgtcctgacaggcctg
aggccgggtgtggagtacatggtccaggtgtgggcccagaagggggaccgggagagcaag
aaggccgacaccaaggccccaacagaaattgacagcccccaaaacctggtgaccgaccgg
gtgacagaggacacagccaccatctcctgggacccagtgcgagccgtcatcgacaagtat
atggtgcgctacacctcggccgatggcgacacccgggaggtgtccgtggggaaggagcag
agcagcaccgtcctgacaggcctgaggccgggtgtggagtacaaggtccaggtgtgggcc
cagatgggggaccgggagagcaagaaggccgacaccaaggccccaacagacattgacagc
cccaaaaacctggtgaccaacaaggtgacagaggacacagccaccatctcctgggaccca
gtgcgagccgtcattgacaagtatatggtgcgctacacctcggctgatggcgacacccgg
gaggtgtccgtggggaaggagcagagcagcaccgtcctgacgggcctgaggccgggtgtg
gagtacatggtccaggtgtgggcccagaagggggaccgggagagcaagaaggccaacgcc
acggccctgacagaaattgacagcccccaaaacctggtgacagaccgggtgacagaggac
acggccactatctcctgggacccagtgcaagccgtcatcgacaagtatatggtgcgctac
acctcggccgatggcgacacccgggaggtgtccgtggggaaggagcagagcaccaccgcc
ctgacgggcctgaggccgggtatggaatacatggtccaggtgtgggcccagaagggggcc
cgggagagcaagaaggccgacaccacggccctgacagacatcgaccctcccagaaacctt
cgtccgtcggctgtcacccagtctggaggggtgctgacctggacagccccctctgctcag
atcgatggctacattctcacctaccagttcccagatggcaccgttaaggaggtacagctg
ggaagaggggacaagaggcttgagttgcaaggccttgagcagggcatcacctaccctgtc
tccttggttgcctttaagggtgatcgacggagcaggagtgtatccaccagcctttccaca
gttggtgcacgtttcccacatcctgcggactgcagtcaagttcagcagaatagcaatgtc
gccagtggtatgtacaccatctacctgcatggagactccaggcggcccctgcgggtgtac
tgtgacatggacacggacggaggcggctggatcgtcttccagaggcgcaacactgggcag
ctggatttcttcaagcgctggcggacctacgtggaaggctttggggaccccatgaaggag
ttctggcttggactcgacaaactacacaatctcaccactggcacccctactcgctacgag
gtgagagtggacctccagaccgccaatgagtccgcctacgccgtgtacgatgccttccag
gtggcctccagcaaggagcggtaccggctctccgttgggaaatacagaggcacagcaggg
gatgctctgacttaccacaatggatggaagtttacaactttcgacagagacaatgatatc
gccctcagcaactgtgccctgacccatcatggtggctggtggtacaagaactgccacttg
gccaaccccaatggcagatacggggagaccaagcacagtgagggggtgaactgggagcca
tggaaaggacatgaattctccattccttatgtggagttgaaaatccgccctcatggctac
agtggggagcaagtcctgggcagaaagaagcggacactaggagaaaattcgagaacgttc
tga
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