Lutra lutra (Eurasian river otter): 125085959
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Entry
125085959 CDS
T08100
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125085959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llv03041
]
125085959
Spliceosome [BR:
llv03041
]
Common components
Common spliceosomal components
hnRNP proteins
125085959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNP_M_NLS
RRM_MARF1
RRM_3
RRM_occluded
Collagen_mid
RBD_DEAH11
RRM_5
PhageMin_Tail
Motif
Other DBs
NCBI-GeneID:
125085959
NCBI-ProteinID:
XP_047560902
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All DBs
Position
1:218254356..218295682
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AA seq
763 aa
AA seq
DB search
MAAGVEAAAEVATTETKMEEESGAPGVPSGNGAPGPKGEGERPTQNEKRKEKNIKRGGNR
FEPYANPTKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFK
MEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKVMATTGGMGMGPGGPGMINIP
PSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKD
GKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKMDERALPKGDFFPPERPQQLPHG
LGGIGMGLGPGGQPIDANHLNKGLGMGNLGPAGMGMEGIGFGINKMGGMEGPFGGGMENM
GRFGSGMNMGRINEMERVMGGGFERDFARNKMGMSRSFGEPLGRGMEILSNALKRGEIIA
KQGGGGGGGSVPGIERMGPGIDRIGGAGMERMGAGLGHGMDRVGSEIERMGLVMDRMGSV
ERMGSGIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPIDRVGQT
IERMGSGVERMGPAIERMGLSMERMVPAGMGAGLERMGPVMDRMATGLERMGANNLERMG
LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGGGGASFDRAIEMER
GNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKME
NGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaggggtcgaagcggcggccgaggtggcgacgacggagaccaaaatggaggag
gagagcggcgcgcccggcgtgccaagcggcaacggggctccgggcccgaagggtgaagga
gagcgacctactcagaatgagaagaggaaggagaaaaacataaaaagaggaggcaatcgc
tttgagccatatgccaatccaactaaaagatacagagccttcattacaaacatacctttt
gatgtgaaatggcagtcacttaaagacctggttaaagaaaaagttggtgaggtaacatac
gtggagctcttaatggacgctgaaggaaagtcaaggggatgtgccgttgttgaattcaag
atggaagaaagcatgaaaaaagctgccgaagttctaaacaagcatagtctgagtggaaga
ccactgaaagtcaaagaagatcctgatggtgaacatgccaggagagcaatgcaaaaggtg
atggctacgaccggtgggatgggtatgggaccaggtggcccaggaatgattaatatccca
cccagtatcctaaataatcctaacatcccaaatgagattatccatgcattgcaggctgga
agacttggaagcacagtatttgtagcaaatctggattataaagttggctggaagaaactg
aaggaagtatttagtatggctggtgtggtggtccgagcagacattcttgaggataaagat
ggaaagagtcgtggaataggcactgttacttttgaacagtccattgaagctgtgcaggct
atatctatgtttaatggtcaactgctatttgatagaccaatgcacgtgaaaatggatgag
agggccttaccaaagggagattttttccctcctgagcgtccacagcaacttccccatgga
cttggtggtattggcatggggctaggcccaggaggacagccgattgatgccaatcacctg
aacaaaggccttggcatgggaaacctaggacccgcaggaatgggaatggaaggcatagga
tttggaataaataaaatgggaggcatggagggaccttttggtggcggtatggaaaacatg
ggtcgatttggatcagggatgaacatgggcagaataaatgagatggagcgtgtcatgggt
ggaggatttgagagagactttgccagaaacaagatgggaatgtctcgaagctttggcgag
ccccttggcagaggaatggaaatcctaagtaatgcactgaagagaggagagatcattgca
aagcagggaggaggtggaggtggaggcagtgtccctgggatcgagaggatgggccctggc
attgaccgcattgggggtgccggcatggagcgcatgggcgcaggcctgggccatggcatg
gatcgtgtgggctctgagatcgagcgcatgggcctggtcatggaccgcatgggctcagtt
gagcgcatgggctccggcatcgagcgcatgggtccactgggcctcgaccacatggcctcc
agcatcgagcgcatgggccagaccatggagcgcatcgggtctggcgtggagcgcatgggt
gccggcatgggcttcggccttgagcgcatggccgcgcccatcgaccgtgtaggccagacc
attgagcgcatgggctctggtgtggagcgtatgggccctgccatcgagcgaatgggcctg
agcatggagcgcatggtgcccgcaggcatgggggctggcctggagcgcatgggccccgtg
atggatcgcatggccaccggcctggagcgcatgggcgccaacaacctggagcgcatgggc
ctagagcgaatgggcgccaacagcctggagcgcatgggcctggagcgaatgggcgccaac
agcctggagcgcatgggtcctgccatgggtccagccctaggtgccggcattgagcgcatg
ggcctggccatgggtggcggtggcggtgccagctttgaccgcgccatcgagatggagcgt
ggcaacttcggaggaagcttcgcaggttcctttggcggagctggaggccatgctcctggg
gtggccaggaaggcctgccagatatttgtgagaaatctcccatttgattttacatggaag
atgctaaaagacaaattcaacgaatgtggccacgtgctgtatgccgacatcaagatggag
aacgggaagtccaaggggtgcggtgtggttaagtttgagtcgccagaggtggctgagaga
gcctgccggatgatgaatgggatgaagctgagtggccgagagattgatgttcgaatcgat
agaaatgcttaa
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