Lutra lutra (Eurasian river otter): 125085984
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Entry
125085984 CDS
T08100
Name
(RefSeq) histone-binding protein RBBP4-like
KO
K10752
histone-binding protein RBBP4
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03082
ATP-dependent chromatin remodeling
llv03083
Polycomb repressive complex
llv04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125085984
03083 Polycomb repressive complex
125085984
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
125085984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
llv03036
]
125085984
Chromosome and associated proteins [BR:
llv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
125085984
Histone modification proteins
HAT complexes
HATB complex
125085984
HDAC complexes
Sin3A-HDAC complex
125085984
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
125085984
PRC2.2
125085984
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
125085984
Heterochromatin formation proteins
Other heterochromatin formation proteins
125085984
Chromatin remodeling factors
NuRD complex
125085984
NuRF complex
125085984
NuRF complex (fruit fly)
125085984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF12
ANAPC4_WD40
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_RIG_1st
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
125085984
NCBI-ProteinID:
XP_047560936
LinkDB
All DBs
Position
15:64910923..64913213
Genome browser
AA seq
425 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSIHRLVLGTHMSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRACYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVGDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
EGQGS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaggaagcagcctttgatgacgcagtagaagaacgtgtgatcaacgaagag
tacaaaatatggaagaagaacaccccttttctttatgatttggtgatgacccatgccctg
gagtggcctagcctaactgcgcagtggcttccagatgtaaccagaccagaagggaaagac
ttcagcattcatcgacttgttctgggaacacacatgtccgatgaacagaaccatcttgtg
atagccagtgtgcagctccctaacgatgatgctcagtttgatgcttcacactacgacagt
gagaaaggagaatttggaggttttggctcagttagtggaaaaattgaaatagaaatcaag
atcaaccatgaaggagaagtaaaccgggcatgttatatgccccagaacccttgtatcatt
gcaacaaagactccatccagtgatgttcttgtttttgactatacaaaacatccttccaaa
ccagacccttctggagagtgcaacccagacttgcgtctccgtggacatcagaaggaaggc
tatggactttcttggaacccaaatctcagtgggcacttacttagtgcttcagacgaccac
accatctgcctctgggacatcagtgctgttccaaaggaaggaaaagttggggatgcgaag
accatctttacagggcatacagcagtagtagaagatgtttcctggcatctgctccatgag
tctctgtttgggtcagttgctgatgatcaaaaacttatgatctgggatactcgttcaaac
aatacttccaaaccaagccactcagttgatgctcacactgctgaagtgaactgcctatct
ttcaatccttacagtgagttcattctggccacaggatcagccgacaagactgttgccttg
tgggatctgagaaatctgaaacttaagttgcattcctttgaatcacacaaggatgaaata
ttccaggttcagtggtcgcctcacaatgagaccattttggcttccagtggtactgatcgc
agactgaatgtttgggatttaagtaaaattggagaggaacaatccccggaagatgcagaa
gatgggccaccagaattgttgtttattcatggtggtcacactgccaagatatctgatttc
tcctggaatcccaatgaaccttgggtgatttgttctgtatcagaagacaatatcatgcaa
gtgtggcaaatggcagagaacatttacaatgatgaagatcctgaaggaagcgtggatcca
gaaggacaagggtcctag
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