Lutra lutra (Eurasian river otter): 125085991
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Entry
125085991 CDS
T08100
Name
(RefSeq) LOW QUALITY PROTEIN: neurofascin-like
KO
K06757
neurofascin
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125085991
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
llv04515
]
125085991
Cell adhesion molecules [BR:
llv04515
]
Immunoglobulin superfamily
L1 family
125085991
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
V-set_CD47
Ig_VEGFR-1-like_5th
BiPBP_C
DUF4998
Motif
Other DBs
NCBI-GeneID:
125085991
NCBI-ProteinID:
XP_047560947
LinkDB
All DBs
Position
15:43880424..44059789
Genome browser
AA seq
1444 aa
AA seq
DB search
MRRLAARGAAGDAGEVAAPATDSTDCAQGRSPRPRRLIDLCAIWDPGAFLPAASWKSASG
IARRRLNEAETLSSVRQAQLERLEAARPRRPGSRERGPVLRMARQQPPPWVHAAVLLCLL
CLSGAIEIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNS
RYFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKYGTALSNRIRLQVSKS
PLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYF
SNVMLQDMQTDYSCNARFHFTHTIQQKNAFTLKVLTTRGVAERTPSFMYPQGTASSQMVL
RGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLAS
NKMGSTRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMINGEPLQS
APPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQL
IRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIY
TCVATNILGKAENQVRLEVKDPTRIFRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLK
DDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNH
LAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGXWHDHS
KFPGSCNSAVLQLSPYVNYQFGSLXINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGT
RKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRESWNNVTVWGSRYVVGQTPVYVPYEI
RVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQWNRVYPDTVQGQLR
EYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRGDGPR
SETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAFNGTKLGK
QIVENFSPNQTKFTMQRADPVSRYRFTLSARTQVGSGEAVTEESPAPPNEATPTAAPPTW
PPTTVGATGAVSSTDATAPAATTEATTVPTIPSVAPTTVATTTAATTTTTAATTAERPPT
TASGTKMPESAPDRQSIWNVTVLPNSKWANITWKHNFGPGTDFVVEYIDSNHTKKTVPVK
AQAQPIQLTDLYPGMTYTLRVYSRDNEGISSTIITFMTSTAYTNNQADIATQGWFIGLMC
AIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQT
SLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAI
YSLA
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggctggcggcgagaggcgctgcaggggacgcgggggaagtggcggcgccggcg
acggacagcacggactgcgcccagggccggagcccgcgccctcggaggttgattgactta
tgtgcgatttgggaccctggagctttccttcccgctgcaagctggaagagcgcctctggt
atcgcaagaaggaggctgaatgaggcagagacgctgagctctgtccggcaggcccagtta
gagcggctggaggcggcaagaccccgcaggccggggagcagggagcggggccccgtgctg
aggatggccaggcagcagccgccgccctgggtccacgcagctgtcctgctctgcctcctc
tgcctcagtggggccatcgagattcctatggatccaagcattcagaatgagctatcccag
cccccaaccatcaccaagcagtctgtgaaggaccacatcgtggatccccgcgacaacatc
ctgatcgagtgtgaagccaaggggaaccctgcccccagcttccactggactcgaaacagc
aggtacttcaacatcgccaaggaccctcgagtgtcaatgaggaggcggtctgggaccctg
gtgatcgacttccgcagtgggggccggcccgaggaatatgagggggaataccagtgcttc
gcccgcaacaaatatggcacggccctgtccaacaggatccgcctgcaggtgtccaagtct
cccctgtggcccaaggaaaacctagaccctgtcgtggttcaagaaggcgctcccttgacg
ctccagtgcaaccccccgcccggacttccgtccccagtcatcttctggatgagcagctcc
atggagcccatcacccaagacaagcgtgtctcccagggccacaacggcgacctgtatttc
tctaacgtgatgctccaggacatgcagacggactacagctgcaatgcacgtttccacttc
acccacaccatccagcagaagaacgccttcaccctcaaggtcctcaccacgcgaggagtt
gcagaaaggacacccagcttcatgtacccccagggcacggcgagcagtcagatggtgctg
cgcggcatggatctcctgctggagtgcatcgcctccggggtcccaacaccagacatcgcg
tggtacaagaagggtggggacctcccctccgacaaggccaagtttgagaactttaacaag
gctctgcgcatcaccaacgtctccgaggaagactccggggagtatttctgcctggcctcc
aacaagatgggcagcaccaggcacacgatctcggtgagagtaaaggctgctccctactgg
ctggacgaacccaagaaccttatcctggctcctggcgaggatgggaggctggtgtgtcga
gccaatgggaaccccaagcccactgtccagtggatgataaatggggagcctctgcagtcg
gcaccacccaacccaaaccgtgaggtggccggggacaccatcatcttccgggacacccag
atcagcagcagggcggtgtaccagtgcaacacgtccaacgagcacggctacctgctggcc
aacgccttcgtcagcgtgctggatgtgccaccccggatgctgtcaccccggaaccagctc
attagggtgatcctgtacaaccggacacggctggactgtccgttctttgggtcccccatc
cccacactccgatggtttaagaacgggcaggggagtaacctggatggtgggaactaccat
gtctatgagaacggcagtctggaaatcaagatgatccgcaaagaggaccaaggcatctac
acctgtgttgccaccaacatcctgggcaaagctgaaaaccaggtccgcctggaggtcaaa
gaccccaccaggatcttccggatgcccgaggaccaggtggccaaacggggcaccacggtg
cagctggaatgtcgggtgaagcacgacccctccctgaagctcacggtctcctggctaaag
gatgatgagcctctctacatcggaaacaggatgaagaaggaagacgactcactgaccatc
ttcggtgtggctgagcgggaccagggtagttacacctgtgttgccagcactgagctggac
caggacctggccaaggcctacctcactgtgctagctgatcaggccactccaactaaccat
ttggcggccctgcccaaaggacggccagaccgaccccgggacctggagctcacagacctg
gccgagaggagtgtgaggctgacctggatcccaggggatgacaacaacagccccatcaca
gactacgtcgtccagttcgaagaggaccagttccagcctgggntctggcacgaccattcc
aagttcccgggcagttgtaactctgccgtcctccagctgtccccatatgtcaattaccag
ttcgggtcattgnncatcaacgaggtgggcagcagccaccccagcctcccctccgagcgc
taccggaccagcggggcgccccctgagtccaatcctgccgacgtgaagggagaaggcacc
aggaagaacaacatggagatcacgtggacgcccatgaacgccacctccgcctttggcccc
aacctgcgctacatcgtcaagtggcggaggagagaaactcgagagtcgtggaacaatgtc
acagtctggggctcccgctacgtggtagggcagacccccgtctacgtgccctatgagatc
cgagtccaggccgaaaatgactttggaaagggccctgagccagacactgtcatcggttac
tccggggaagattatcccagagctgcacccactgacgttaaaatccgagtcctgaacagc
acggccatcagcctgcagtggaaccgtgtctaccccgacacggtgcagggccaactcagg
gagtaccgagcctactactggagggagagcagcttgctgaagaacctgtgggtgtctcag
aagaggcagcaggccagcttccctggtgaccgcccccgtggcgtggtgtcccgcctcttc
ccctacagtaactacaagctggagatggtcgtggtcaatgggagaggcgatgggcctcgc
agtgagaccaaggagttcaccaccccggaaggagtacccagtgcccccaggcgtttccga
gtccggcagcccaacctggagacaatcaacctggagtgggatcacccggaacaccccaac
gggatcctgatcggatacacgctcaaatacgtggcctttaatggaaccaaattaggaaag
cagatagtggaaaacttctctcccaatcagaccaagttcacgatgcaaagagcagacccc
gtgtcgcgctaccgctttaccctcagtgccaggacgcaggtgggctctggggaagctgtc
accgaggagtcaccagcacccccgaatgaagccactccaaccgcagctcctcccacgtgg
cccccgaccacggtgggtgcgacaggcgctgtgagcagtactgacgctactgcccccgct
gccaccaccgaagccacaacagtccccaccatcccaagtgtcgcacctaccaccgtggcc
accaccaccgctgccaccactacaaccactgccgccaccaccgcagagaggcctcccacc
accgcctccgggactaagatgcccgaatctgcccccgacaggcagtccatatggaacgtc
acggtgctccccaacagtaaatgggccaacatcacctggaagcacaatttcgggcccgga
actgactttgtggttgagtacatcgacagcaaccatacgaaaaaaactgtccctgttaag
gcccaggcccagcctatacagctgacagacctctatcccgggatgacttacaccttgcgc
gtttattcccgggacaacgagggcatcagcagtaccatcatcacctttatgaccagtaca
gcttacaccaacaaccaggcagacatcgccacccagggctggttcattgggctcatgtgt
gccatcgccctcctggtgctgatcctgctcatcgtctgtttcatcaagaggagtcggggc
ggcaagtacccagtgcgagagaagaaggatgttcccctgggccccgaagaccccaaggaa
gaggacggctcctttgactacagtgacgaggacaacaagcccctgcagggcagccagacg
tccctggatggcaccatcaagcagcaggagagtgacgacagcttggtggactatggcgag
ggtggagaggggcagttcaacgaggacgggtccttcatcggccagtacactgtcaaaaag
gacaaggaggagacagagggcaatgaaagctcagaggccacgtcgcctgtcaacgccatc
tattctctggcctaa
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