Lutra lutra (Eurasian river otter): 125086190
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Entry
125086190 CDS
T08100
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 isoform X1
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
125086190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
llv04040
]
125086190
Ion channels [BR:
llv04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
125086190
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
125086190
NCBI-ProteinID:
XP_047561333
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All DBs
Position
15:complement(68716451..68726949)
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AA seq
782 aa
AA seq
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MEAEQRPTTGADERATPGLEAAPSAAPAPAAAASGPLSGPASGPEPKRRQLGTLLQPTVN
KFSLRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRFYWDLTMLLLMVGNLIVLPVGITFF
KEENSPPWIVFNVLSDTFFLLDLVLNFRTGIVVEEGAEILLAPRAIRSRYLRTWFLVDLI
SSIPVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIF
HMTYDLASAVVRIGNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVAINHMVNHSWGRQY
SHALFKAMSHMLCIGYGQQAPVGTPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRR
QYQEKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIINFT
CRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLAR
GARDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFET
VAMDRLRRIGKKNSVLQRKRSEPSPGSSGGTMEQHLVQHDRDMARGVRGLAPGTGARLSG
KPVLWEPLVHAPLQAAAVTSSVAIALTHQRGPLPLSPDSPAALLARSARRSAGSPASPLV
PVRGGPLLARGPWASTSRLPVPPARTLHASLSRAGRSQVSLLGPPPGGGGRRLGLRGRPL
SASQPSLPQRAAGDGSPVRKGSGSERLSSSGLLAKLPGTAQPPRPSVPEPAAPRGPQLSA
NM
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagcagcggccgacgacgggggccgacgaacgggcgacccctgggctggag
gcggcgccttctgctgcccccgcgcctgcggccgcggcctcaggaccgctctccgggccc
gcgtcggggcccgagcccaagcggaggcagctcgggacgctgctccagcccacggtcaac
aagttctcccttcgcgtgtttggcagccacaaagcagtggaaatcgagcaggagagggtc
aagtcagcgggggcctggatcatccacccctacagcgacttccggttttactgggacctg
accatgctcctgctgatggtggggaacctcattgtgctgcctgtgggcatcaccttcttc
aaggaggagaactccccgccttggatcgtcttcaacgtcctctcggacaccttcttcctg
ctcgacctggtgctcaacttccgcacgggcatcgtggttgaggagggcgctgaaatcctg
ctggccccgcgggccatccggtcgcgctacctgcgcacctggttcctggtcgacctcatc
tcgtccatcccggtggactacatcttcctggtggtggagctggagccgcgactggacgcc
gaggtctacaagacagcgcgcgccctgcgcatcgttcgcttcaccaagatcctcagcctg
ctgcggctgctccgcctctcccgactcatccgctacatccaccagtgggaggagatcttt
cacatgacctatgacctggccagtgccgtggtgcgaattggcaacctcattggaatgatg
ctgctgctgtgccactgggacggctgtctgcagttcctggtccccatgctgcaggacttc
cctcccgactgctgggtcgccatcaaccacatggtgaaccactcgtgggggcgccagtat
tcccacgccctgttcaaggccatgagccacatgctgtgcatcgggtacgggcagcaggcg
cctgtgggcacgcccgacgtctggctcaccatgctcagcatgatcgtgggtgccacatgc
tacgccatgttcattggccacgccacagcgctcatccagtccctggactcttcccgacgt
cagtaccaggagaagtacaagcaggtggagcagtacatgtccttccacaagctgccggcc
gacacccggcagcgcatccacgagtactacgagcaccgctaccaggggaagatgttcgac
gaggagagcatcctgggggagctgagcgagccgcttcgggaggagatcatcaacttcacg
tgccggggcttggtggcccacatgccgctgtttgcccacgctgaccccagcttcgtcacg
gccgtgctcaccaagctgcgctttgaggtcttccagccgggggacctcgtggtgcgtgag
ggctccgtgggcaggaagatgtacttcatccagcatgggctgctcagtgtgctggcgcgc
ggcgctcgggacacccgcctcactgacggatcctactttggggagatctgtctgctgaca
cgcggccgacgcacggccagcgtccgggcagacacctactgccgcctctactcgctcagc
gtggaccatttcaacgcggtgctggaggagttccccatgatgcggcgggccttcgagacc
gtggccatggatcggctgcgccgcatcggcaagaagaactccgtgctgcagcggaagcgt
tctgagcccagtccagggagcagcgggggtaccatggagcagcacttggtgcaacacgac
agggacatggcccggggtgttcggggcctagccccaggcacaggagcccggctcagcggg
aagccggtgctgtgggagccactggtgcacgcacccctgcaggcagccgcagtgacctcc
agtgtggccatcgccctgactcaccagcggggccctctgcccctctcccctgactctcca
gccgccctccttgctcgctctgctcgacgctctgcaggttccccagcctccccactagtg
cctgtccgaggtggccctctgctggcccggggtccgtgggcctctacctcccgcctgcct
gtcccacctgcccgaaccctccatgccagcctgtcccgggccggacgatcccaggtgtcc
ttgctgggtccccccccaggaggaggtggacggcgactaggacttcggggccgcccactc
tcagcctcccaaccctctctgcctcaacgagcagccggggacggctctcctgtgcgcaaa
ggctcaggaagtgaacgcctgtcctcctcagggctcctggccaagcttccagggacagcc
cagccccccaggccatcagtgcctgagccagctgcccctcggggcccccagctctctgcc
aacatgtga
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