Lutra lutra (Eurasian river otter): 125086255
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Entry
125086255 CDS
T08100
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
llv
Lutra lutra (Eurasian river otter)
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
llv04131
]
125086255
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
llv04147
]
125086255
Membrane trafficking [BR:
llv04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
125086255
Exosome [BR:
llv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125086255
Exosomal proteins of bladder cancer cells
125086255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
125086255
NCBI-ProteinID:
XP_047561413
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Position
15:65070941..65122690
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AA seq
1224 aa
AA seq
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MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDAESITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIVICNRKLEALCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDYGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVEAAEGLGDDGLGKGQEEGGGWDVEEDLELPPELDIPPGAAG
GAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVTQFGPYKQLFL
QTFARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQLCYQLTTVG
KFEEAVEKFRSILLSAPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAAAFARRLLELGPKPEVAQQ
TRKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQI
CKVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaattcgagaccaagagcgcgcgggtcaaagggctcagttttcaccccaaa
agaccttggatcctgaccagtttacacaatggagtcatccagttatgggactatcggatg
tgtacccttatcgacaagtttgatgaacatgatggtccggtacgaggcattgacttccac
aagcagcagccgttgtttgtttctggaggagatgactataagattaaggtgtggaattac
aagcttcggcgctgtctcttcacattgcttgggcatttggactacattcgcaccacattt
ttccatcacgaatatccctggattctgagcgcctcagatgaccagaccatccgagtgtgg
aactggcagtctagaacctgtgtctgcgtgttaacaggacacaaccattatgtaatgtgt
gctcagtttcacccctcagaagacctggttgtgtcagccagcctggaccagactgtgcga
gtttgggatatttctggtctaaggaaaaaaaacttgtctcctggtgcagtggagtccgac
gtgcgaggaataaccggggtcgatctgttcggaacaaccgacgcggtggtcaaacacgtg
ctggagggtcatgatcgtggagtaaactgggctgccttccaccccaccatgccccttatc
gtctctggggcagacgaccgacaagtgaagatctggcgcatgaacgagtcgaaggcatgg
gaggttgacacctgccgcggtcattacaacaacgtttcttgtgctgtcttccatcctcgc
caagagctgatcctcagcaattcggaggacaagagtatccgagtctgggatatgtccaag
cggactggggttcagaccttccgtagggaccatgatcgtttctgggtcctagctgcccac
cccaatctgaacctctttgcagcaggccatgacggtggcatgattgtgtttaaactggag
cgggaacggccagcctatgcggttcacggcaacatgctacattatgtcaaggaccgattc
ctgcgtcagttggatttcaacagctccaaagacgtagccgtgatgcagttgcggagtggt
tccaagtttccggtgttcaacatgtcatacaatccagcagaaaatgcagtcctactgtgt
acgagggccagcaatttagagaacagtacctacgacctgtacaccatccccaaggatgcg
gactcccagaatcccgacgctccagaagggaaacgatcctcaggcctgacagccgtttgg
gttgctagaaatcggtttgctgtcctagatcggatgcattcgcttctgatcaaaaatctg
aagaatgagatcaccaaaaaggtacaggtgcccaactgcgatgagatcttctatgctggc
accggcaacctcctgcttcgagatgccgaatccatcacgctctttgacgttcagcagaag
cggactctggcctcggtgaagatttctaaggtgaaatatgttatctggtcagcagacatg
tcccacgtagcactactggccaaacatgccattgtcatctgtaaccgcaaactggaggct
ctgtgtaacattcatgagaacattcgcgtcaagagtggggcctgggatgagagtggggtc
tttatctataccacaagcaaccacatcaaatatgccgtcaccactggggactatgggatc
atccggactctggatttacccatctacgtcactcgggtgaagggcaacaacgtgtattgc
ctggaccgggagtgtcgtccgagggtgctcaccattgatcccacagagttcaagttcaaa
ctggctttgatcaacagaaaatacgatgaggtgctgcacatggtgaggaacgccaagcta
gtcggccagtccatcatcgcttacctccagaagaagggctacccggaagtggctctgcat
tttgtcaaggacgagaagactcgctttagtctggcacttgagtgtggaaacattgagatt
gctctggaagcagccaaagcgctggatgacaagaactgctgggagaagctcggagaagtg
gccttgctccaggggaaccaccagattgtggaaatgtgttatcagcgcaccaaaaacttc
gacagactttctttcttgtaccttatcactggcaacctagagaagcttcgcaagatgatg
aagattgctgagatccgaaaggacatgagtggccattatcagaatgccctctacctgggc
gacgtgtccgagcgggtccggatcctgaagaactgcgggcagaagtcactggcctacctc
accgctgctactcatggcttagatgaagaggctgagagcctgaaggagacatttgaccca
gagaaggagaccatcccggacattgaccctaatgccaagctgctccagcccccggcaccc
atcatgccgttggacaccaactggcccttgctgaccgtgtccaaaggcttctttgaaggc
tccattgccagcaagggcaaggggggcgcgttggccgccgacattgacatcgacaccgtt
ggcaccgagggctggggagaggatgcggagctgcagctggacgaagacgggtttgtggag
gctgcagaaggtctgggggacgatggtcttggcaagggacaggaagaaggaggcggctgg
gatgtcgaagaggacctggagctccctcctgagctggatataccccctggagcagctggg
ggtgctgaggacgggttctttgtgccccccaccaagggaaccagcccgactcagatctgg
tgcaataactctcagcttccagtagatcacatcctggccggctcttttgaaacagccatg
cggcttcttcacgaccaagtgggggtcacccagtttggcccttacaagcagctgttccta
cagacctttgcccgcggccgtaccacctaccaggccctgccctgcctgccctccatgtat
ggctatcctaatcgcaactggaaggatgcagggctgaagaacggtgtgccggccgtgggc
ctgaagctgaatgacctcatccagcggctgcagctctgctaccagctcaccacagtgggc
aagtttgaggaggctgtggagaagttccgctccattttgctcagcgcgcctcttctcgtg
gtggacaacaaacaggagatagcggaggcccagcagctcatcaccatctgccgtgagtac
atcgtgggtctgtccatggagatagagaggaagaagctgcccaaagagactctggagcag
cagaagcgcatctgcgagatggccgcctacttcacccactcgaacctgcagccggtgcac
atgatcctggtgctgcggacggccctcaacctcttcttcaagctcaagaactttaagaca
gccgccgcctttgctcggcgcctcttggaacttgggcccaagccggaggtggctcagcag
acccgtaaaattctgtctgcctgtgagaagaaccccacggatgcctaccagctcaattac
gacatgcacaacccttttgacatctgtgctgcatcctatcggcctatctaccgtggaaag
ccagtggagaagtgtccgctcagcggggcctgctattccccggagttcaagggtcaaatc
tgcaaggtcactacagtgacagagatcggcaaagacgtcattggtttaaggatcagtcct
ctgcagttccgctaa
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integrated database retrieval system