Lutra lutra (Eurasian river otter): 125086614
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Entry
125086614 CDS
T08100
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04064
NF-kappa B signaling pathway
llv04622
RIG-I-like receptor signaling pathway
llv05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
125086614
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125086614
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125086614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
llv04121
]
125086614
Enzymes [BR:
llv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125086614
Ubiquitin system [BR:
llv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125086614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
ANCHR-like_BBOX
zf-B_box
C5HCH
MnmE_helical
NigD_N-like
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
125086614
NCBI-ProteinID:
XP_047561831
LinkDB
All DBs
Position
16:complement(31536334..31555355)
Genome browser
AA seq
639 aa
AA seq
DB search
MAELVPLAEELSCSICLEPFKEPVTTPCGHNFCGSCLDETWAVQGPPYLCPHCRASYHAR
PQLRKNTVLCAVVEQFLQAEEARATPPPPDDWKLPTRAAAPSPAGPVACDHCLKEAAVKT
CLVCMASFCREHLQPHLDSPAFRDHQLQPPVQDLMRRKCPRHNRLRELFCPQHDECICHI
CLVEHKACSPVPLSQASADLETKLKHKLTVIYSQINGASRALEDVRARQHDVREATNRRM
EQLRQEYMEIKALIDAAEATSTRKIKEEEKRVNTKFDNIYQILLKKRSEIQNLKEEVELA
LTKGDEFEFLEKGLKLQGVSTKPVYVPKVELNQELIRGVCQGTSDLKDELKRYIRQSQDK
KPEEPTGSGNPGEHGPAPTHKPTHSAKKAPKEEKKPKKPPPASASKMPTFGASATKMPTF
GAQGEFLDPEGIGKAPTAQPNAAAVKAKVLETFLAKSRPELLEYAIKFSLDYNTAHNKVA
LSENYTVASVAESPLNYQPHPKRFMYCSQVLGLHCYKKGIHYWEVELQKNNFCGVGVCYG
SMPRQGPESRLGRNSASWCVEWFNTKISAWHNNVEKTLPSTKATRVGVLLNCDHGFVIFF
AVSDKVHLMYKYKVDFTEALYPAFWVFSAGAMLSICSYK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggtccccttggccgaggagctgtcgtgctccatctgcctggagcctttc
aaggagccggtcaccacgccctgcggccacaacttctgcggctcgtgcctggacgagacg
tgggccgtccagggcccaccgtatctgtgcccgcactgccgcgccagctaccacgcgcgg
ccgcagctgcgcaagaacacggtgctgtgcgcggtggtggagcagttcctgcaggcggag
gaggcccgggcgacgcccccgccccccgacgactggaagctgcccacccgcgccgccgcg
cccagcccggcgggcccggtggcctgtgaccactgcctgaaggaggccgccgtcaagacg
tgcctggtgtgcatggcctccttctgccgggagcacctgcagccgcatctggacagcccc
gccttccgggaccaccagctgcagcccccggtccaggacctgatgcgccgcaagtgcccc
cggcacaaccggctgcgggaattattctgcccccagcacgacgagtgcatctgccacatc
tgcctagtggagcacaaggcctgctcgcctgtgcccctgagccaggccagcgccgacctg
gagaccaagctaaagcataagctgaccgtcatctacagtcagatcaatggggcctcgagg
gctctggaggacgtgagagcccggcagcacgatgtgcgggaggctacgaatcggaggatg
gagcagctgagacaggagtacatggaaatcaaggcgctcatcgatgctgcagaggccacc
tccacacggaagataaaggaagaggagaagagagtcaataccaagttcgacaacatctac
cagatccttctcaagaagaggagtgagatccagaatctgaaggaggaggttgaacttgcc
ctgaccaagggggacgagttcgagtttctggagaaagggctaaagctgcaaggagtgtcc
acaaagccggtctacgtccccaaggtggagctaaatcaggagctgataaggggtgtctgt
cagggcacctcagacctcaaagatgagctgaagcggtatatcaggcagtcccaggacaag
aagcctgaggaacccaccggctcagggaaccccggagagcatggcccagcacccacgcac
aaacccacccactctgcgaaaaaggcccctaaagaagaaaagaaacccaagaaacctccc
cctgcctcagcctccaagatgcccaccttcggagcctcggccaccaagatgcccaccttc
ggagcccagggagagttcctggatccggagggtataggcaaagcccccactgcacagccc
aacgcagcggccgtcaaggccaaggtgctggagaccttcttagccaagtccaggcccgag
ctcctggagtatgccattaaattcagcctggactacaacacggcccacaacaaggtggcg
ctgtcggagaactacacggtcgcctctgtggctgaatcacccctgaactaccagccgcat
cccaagaggttcatgtactgctcccaggtgctgggcctgcactgctacaagaaagggatc
cattactgggaggtggagctgcagaagaacaacttctgcggggtgggcgtctgctacggc
agcatgccgcgccagggccccgagagccggctcggccgcaacagcgcctcgtggtgcgtg
gagtggttcaacaccaagatctctgcgtggcacaacaacgtggagaaaacgctgccctcc
accaaggccacgcgggtcggcgtgctgctcaactgtgaccatggcttcgtcatcttcttt
gctgtctccgacaaggtccacctgatgtataagtacaaagtggacttcacggaagcgctg
tacccagccttctgggtgttctctgccggtgccatgctctccatctgctcctacaagtag
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