Lutra lutra (Eurasian river otter): 125086625
Help
Entry
125086625 CDS
T08100
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125086625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
llv03009
]
125086625
Ribosome biogenesis [BR:
llv03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125086625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Cytochrom_D1
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Pox_D5
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
Hira
KNTC1_N
WD40_RFWD3
Beta-prop_Vps41
PQQ_3
Motif
Other DBs
NCBI-GeneID:
125086625
NCBI-ProteinID:
XP_047561880
LinkDB
All DBs
Position
16:26538792..26582597
Genome browser
AA seq
555 aa
AA seq
DB search
MPPERRSRTKPDRRPGVSLGRKSRTKPGRRAGAGPGGPPRKAAPSSQRKPPARPSAAAAA
IAVAAEEERRLRQRNRLTLEEDKPAVERCLEELVFGDVEDNEDALLRRLQGSRVQVQEDS
GDSEVENEAKDNFRFQKKPVWVDEEDEDDEMVDMMSNRFRKDMMKNASESKLSKDKLQKR
LKEEFQHAMGGVPAWAGTSKRKTSSDDESEEDEDDLLQRTGNFISTSTSLPKGILKLKNC
LHANAERPTTARISSVQFHPCAQVVMVAARDNAVSLFQVDGKTNPKIQSIYLEKFPIFKA
CFSATGEEVLATSVHSKVLYVYDMLAGKLIPVHQVRGLKEKIVRSFEVSPDGSFLLINGV
AGYLHLLSMKTKELIGSMKINGRVAASTFSSDSKKLYASSGDGEVYVWDVNSRKCLNRFV
DEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQDSCLQETNPKPIKAIMNLVTGVTSLSF
NPTTEILAIASEEMKEAVRLVHLPSCTVFSNFPVIKKKTVSLVHTMDFSPRSGYFALGNE
KGKALLYRLHHYSEF
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggaacgtagaagccgaacgaaaccggaccggagacccggagtgagtctgggc
cggaagagccgaacgaagccgggccggagagccggagcagggccgggcgggccgccccga
aaggctgctccttcatcccagcggaaaccgccggcccggccgagcgcagcggccgctgcg
atcgcagtcgcggcggaggaggaaaggcggctccggcagcggaaccgcctgacgctggag
gaagacaaaccggccgtggaacggtgcctggaggagctggtgttcggcgacgtcgaggac
aacgaggacgcgttgctacggcgtctgcagggctcgcgggttcaagtgcaggaagactca
ggtgactcggaagtggagaatgaagcaaaagataattttcggtttcaaaagaagccagtt
tgggtggatgaagaagatgaagatgatgaaatggttgacatgatgagcaatcggttccgg
aaagatatgatgaaaaatgccagtgaaagtaaactttcaaaagacaagcttcaaaagaga
cttaaggaagaattccagcatgccatggggggagtacctgcctgggcagggactagtaag
cggaagacatcttcagatgatgaaagtgaagaggatgaagatgatttgttgcaaaggact
gggaatttcatatctacatcaacttctcttcctaaaggaatcttaaagctaaagaattgt
ctccatgctaacgcggaacgtcctaccacggctcggatctcgtccgtgcagttccatcct
tgcgcgcaggtcgtgatggttgccgcgcgagataatgccgtgtcgctgtttcaggttgat
ggaaaaacaaatcctaaaatccagagtatctatttggagaagtttccaatatttaaggcc
tgttttagtgctactggagaagaggttttagccacgagcgtccatagcaaggttctttat
gtctatgatatgctggctggaaagctaattcctgtgcatcaagtgagaggtttgaaagag
aagatagtgaggagcttcgaagtatctccagatgggtccttcttgctgataaatggtgtt
gctggatatcttcatttgctgtcaatgaagaccaaagaactgatcggtagcatgaaaatt
aacggaagggttgcagcatccacgttctcttcagatagcaagaaactatacgcctcttca
ggcgatggggaagtttatgtttgggatgtgaactctagaaaatgccttaacagatttgtt
gatgaaggcagtttatatggattaagcattgccacatctaggaatggacagtatgtggct
tgtggttctaattgtggagtggtaaacatatacaatcaggattcttgtctccaagaaaca
aatccaaagccgataaaagccataatgaacttggttacaggtgttacttctctgagcttc
aatcctactacagaaatcttggcaattgcttcagaagaaatgaaagaagcagtcagattg
gttcaccttccctcctgtacagtattttcaaacttcccagtcattaaaaagaagactgtt
tctcttgttcataccatggatttttctcccagaagtgggtattttgccttggggaatgaa
aagggcaaggccctgctctataggttgcaccattactcagaattctga
DBGET
integrated database retrieval system
