Lutra lutra (Eurasian river otter): 125086813
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Entry
125086813 CDS
T08100
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125086813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
llv03041
]
125086813
Spliceosome [BR:
llv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
125086813
Complex C
U5 SnRNP specific factors
125086813
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
125086813
NCBI-ProteinID:
XP_047562249
LinkDB
All DBs
Position
16:complement(45620186..45656747)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttaccgagggccgggtaacccggtgcccggccctctagcgcca
ttgccagattacatgtcggaggagaagctgcaagagaaagcccgaaaatggcagcaatta
caggccaaacgctatgcggaaaaacggaagtttggatttgtggatgctcagaaggaagac
atgcccccagaacatgttaggaagatcattcgagaccatggagacatgaccaacaggaag
tttcgtcatgacaaaagggtctacttgggtgccctcaaatacatgccccatgcagtcctc
aaactcctggagaacatgcctatgccttgggagcagattcgggatgtgcctgtgctgtac
cacatcactggagccatttcttttgtcaatgagattccctgggtcattgaacctgtctac
atctctcagtgggggtcaatgtggattatgatgcgtcgagaaaaaagagacaggaggcat
ttcaagaggatgcgtttccccccttttgatgatgaggagccacctttggactatgctgac
aacatcctagatgttgaaccactggaggccattcagctagagctggaccctgaggaggat
gcccctgtattggactggttctatgaccaccagccattgagggacagccggaagtatgtg
aatggctctacttaccagcgctggcagttcacactgcccatgatgtctactctctaccgc
ctggccaatcagctcctgacagacttggtagatgacaactacttctatctgtttgatctg
aaggccttctttacctccaaagcactcaatatggctattcctggaggccccaaatttgaa
cctcttgttcgagacatcaatctccaggatgaagattggaatgaattcaacgatattaac
aagatcatcatccggcagcctatccgcactgaatacaagattgcttttccttacctgtac
aacaaccttccacaccatgtccaccttacctggtaccacactcctaatgttgtgttcatc
aaaactgaggatcctgatctcccagctttctactttgatcctttgatcaacccaatttct
cataggcactccgtcaagagccaggaaccgttgcctgatgatgatgaggagtttgagctc
ccagagtttgtggagcccttcctgaaagacacacccctctacacagacaatacagccaat
ggtattgctctgctctgggccccacggcctttcaacttacgctctggtcgcacccgccgc
gccctagacatcccccttgtcaagaactggtatcgggagcattgtcctgccggacagcct
gtgaaagtgagagtctcctaccagaaactactgaagtactatgtgctgaatgccctgaag
caccggcctcctaaagcccaaaagaagaggtacctgtttcgctccttcaaagccaccaaa
ttctttcagtccacgaagctggactgggtggaggtggggctgcaggtgtgccgccagggc
tacaacatgctcaaccttctcattcaccggaaaaacctcaactatctgcacctggattac
aacttcaaccttaaacctgtcaagaccctcaccaccaaggaaagaaagaaatctcgtttc
ggaaatgctttccatctgtgtcgagaagttctgcgtttaaccaagctggtggtggatagt
cacgtgcagtatcgattgggcaatgtggatgccttccagctggcagatggtttgcagtat
atctttgctcacgtggggcagctgacgggcatgtaccggtacaaatacaagctgatgcgg
cagattcgcatgtgcaaggacctgaagcatctcatctattaccgcttcaacacgggccct
gtagggaagggccctggctgtggcttctgggctgctggctggcgggtctggctgtttttc
atgcgtggcatcacccctctgctggaacggtggctgggcaacctcctggcccgacagttc
gaaggtcgacactctaagggggtggcaaaaactgttacaaagcagcgagtggagtcgcat
tttgaccttgagcttcgggcagctgtcatgcatgacattctggacatgatgcctgaggga
atcaaacagaataaggcccggacgatcctgcagcatctcagtgaagcctggcgctgctgg
aaagctaacattccctggaaggtacctgggctgccaacacctatagagaatatgatcctt
cgatatgtgaaggccaaggctgattggtggaccaacactgcccactacaaccgagaacgg
atccgccgtggagccactgtggacaagactgtttgcaaaaagaacctgggccgcctcact
cggctctatctgaaggcagaacaggagcgacagcacaactacctgaaggatgggccatac
atcacagcagaggaagcggtggcagtgtataccaccactgtgcattggttggagagccgg
aggttctcacccatcccattccccccactctcctacaaacatgacaccaagttgctcatc
ttggcgttggagcggctcaaggaagcttacagtgtgaagtctcggttaaaccagtctcag
agggaggagctaggtctgatcgagcaagcctatgacaacccccacgaggcattgtcccgg
atcaagcgtcacctcctcacacagagagcctttaaagaagtgggcattgagttcatggat
ctctatagccacctggtgcccgtatatgacgtggagccactggagaagatcactgatgcc
tacctagaccagtacctttggtatgaagctgacaagcgccgccttttcccgccctggatc
aagcctgctgacacagaaccacctcctctgcttgtttacaagtggtgtcaaggcatcaat
aatctgcaggatgtgtgggagacaagtgagggtgagtgcaatgtcatgctggaatcacgc
tttgagaagatgtatgaaaagatcgacttgaccctgcttaacagactgctgcgactcatc
gtagaccacaacatagctgactacatgacagccaagaacaacgttgtcatcaattataag
gacatgaaccatacaaattcctacgggatcattagaggtctgcagtttgcctcattcatc
gtgcagtactatggcttggtgatggatttgctggtgctaggactgcaccgggccagtgag
atggctgggccccctcagatgccaaatgacttcctcagtttccaggacatagccacggag
gctgcccaccccatccgtctcttctgcagatacatcgatcgtatccacattttcttcagg
ttcacagcagatgaggctcgggacctgatccagcgttacctgacagagcaccctgacccc
aacaacgaaaatatcgttggctataataacaagaagtgctggccccgagatgcccgcatg
cgcctcatgaagcatgatgtcaacttgggtcgagcagtgttctgggacatcaagaaccgt
cttccacggtcagtgactacagttcagtgggagaacagcttcgtgtctgtgtacagtaag
gacaaccccaacctactgttcaacatgtgtggctttgagtgccgcatcctacctaaatgc
cgcaccagctatgaggagttcacccacaaggatggggtctggaacctacagaatgaggtt
actaaggagcggacagctcagtgtttcttgcgtgtggatgatgagtcaatgcagcgcttc
cacaaccgagtgcgtcaaattctgatggcctctggctccaccaccttcaccaagattgtg
aataagtggaacacagctcttataggccttatgacatactttcgggaggctgtggtgaac
acccaggagctcctggacttgctagtgaaatgtgagaacaagatccaaacacgtatcaaa
attggcctcaactccaagatgcccagtcggttccctcctgttgtgttctatacccctaag
gagttgggtggactcggcatgctctcaatgggccatgtgctcatcccccagtctgacctc
aggtggtccaagcagacagatgtaggtatcacacactttcgttcgggaatgagccatgaa
gaagatcagctgattcccaacttgtatcgctatatacagccgtgggagagtgagttcatt
gattcccagcgggtctgggcggagtatgcactgaagagacaagaggccattgctcagaac
agacgactgaccttagaagatctagaagattcatgggatcgtggcattccccgaatcaac
accctcttccagaaggacaggcacacgttggcatatgataagggctggcgggttcgaact
gactttaagcagtaccaggtcttgaagcagaaccctttctggtggacacaccagcggcat
gatgggaagctctggaacctgaacaactatcgtacagacatgattcaggccttgggtggc
gtggaaggcattctggaacacacactcttcaagggcacttacttccctacctgggaaggg
cttttctgggaaaaggccagtggttttgaggagtctatgaagtggaagaagctaactaat
gctcagcgatcaggattgaaccaaattcccaatcgtagattcaccctctggtggtcccca
accatcaaccgagccaacgtatatgtaggctttcaggtgcagctggacctgacgggtatc
ttcatgcatggcaagatccccacactgaagatctctcttatccagattttccgggctcac
ttatggcagaagatccatgagagcattgtgatggacttgtgtcaggtgtttgatcaggaa
ctggatgcactagaaattgagacagtgcaaaaggagacaattcacccacggaagtcctat
aagatgaattcttcctgtgcagatatcctgctctttgcctcctataagtggaatgtctct
cggccctcattgctggcagactctaaggatgtgatggatagtaccaccactcagaagtat
tggattgatatccagttgcgctggggggactatgattcccatgacattgaacgctacgcc
cgggccaagttcctggactacaccacagacaatatgagtatttacccttcgcctactggt
gtgctcattgccattgacctggcatataatctgcacagtgcctacggaaactggttccca
ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaaccctgccttg
tatgtgttacgtgaacggatccgcaaggggctgcaactctattcatctgagcccactgag
ccctatctgtcctctcagaattatggtgagctcttctccaaccagatcatctggtttgtg
gatgacactaatgtctacagagtgactatccacaagacctttgaagggaacttgaccacc
aaacccatcaatggggccatcttcatcttcaatccacgcacagggcagctcttcctcaag
ataatccacacgtctgtgtgggctggacagaagcgtttgggacagttggctaaatggaag
acagctgaggaagtggctgccctcatccgatctctacctgtggaggagcagcccaagcag
atcattgtcaccaggaagggcatgctggacccattggaggtgcacttgctggactttccc
aatattgtgatcaagggatcagaactccagctacctttccaggcctgtctcaaggtggaa
aagtttggggacctcatccttaaagccactgaaccccagatggttctctttaatctctat
gatgactggctcaagactatctcatcctacacggctttctcccgtctcatcctgattctg
cgtgccctgcatgtgaacaatgaccgggcgaaggtgatcctgaagccagacaagactact
attacagaaccacaccacatctggcccactctgactgacgaggagtggatcaaagtggag
gtgcagctaaaagatctcatcttggctgattatggcaagaaaaacaatgtgaatgtggca
tcgctgacacaatcagaaattcgagacatcatcctgggtatggagatctcggcaccatcg
cagcagcggcagcagatagcggagattgagaagcagaccaaggaacagtcacagctgaca
gcaacacagactcgtactgtcaacaagcatggcgatgagatcattacttctaccaccagc
aactatgagacccagactttctcctccaagactgaatggagggttagagccatctctgct
gccaaccttcacctaaggaccaatcatatttatgtttcatctgatgacatcaaggagacc
ggttatacctatatccttcccaaaaatgtgcttaagaagtttatctgcatatctgacctt
cgggcccagattgcaggatacctgtatggagtgagcccaccagataatccccaggtgaag
gagatacgctgcatcgtaatggtaccacagtggggcactcaccagaccgtgcacctgcct
ggccagctgccccagcatgagtacctcaaggagatggaacccttaggatggatccacact
cagcccaatgaatccccccagctgtcaccccaggatgtcactacccatgctaagatcatg
gctgacaacccatcttgggatggtgaaaagaccattatcatcacctgcagcttcacacca
ggctcctgcacactgaccgcctataagctgacccccagtggctatgaatggggtcgccag
aacacagacaagggcaacaatcccaagggctatctaccctcacattatgaaagggtccag
atgctgctgtcagaccgtttccttggcttttttatggttcctgcccagtcctcatggaac
tacaactttatgggtgtccggcatgatcccaacatgaagtatgagctgcagctggcaaat
cctaaagagttctaccacgaggtgcacaggccttcccacttcctcaacttcgcgctcctg
caagagggcgaggtctactctgcggaccgagaggacctctatgcctag
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integrated database retrieval system
